PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16528.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB_related

Protein Properties

Length: 688aa MW: 76403.9 Da PI: 9.7479

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16528.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.6	1.2e-07	589	638	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ OVA16528.1 589 RRPFSVSEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 638 678999******************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
MVLQKRLDYG FNGYQVPAIP RASRSARGRR GSFRQKVEDK QMCAFELLAT VAGKLLQEKE 60 SSSDSSNASP GRSQQAIVKD NVKQEQQYEE KVFKVEPNEQ GSSDETVLVS ELESQGHNQS 120 YSSKDFPIAQ NDVSVGLSSD IDNADQSEKA GCAKTSTANN RNELGKFLKV ERDSPGYGQS 180 CEVRVVDRIG RQLEARSHKI GNLINGTVRD TFCSEDLMEL DNKPPALVGS DSSIEVPKCK 240 DNHIPRGSFP GFRDDEKVVS RDDDENSSGC TQPSTRNMKA FRPSPRLGDR RIRKLLASKY 300 WKVAPKLKDR EHSRTDMKLI FHNRKTCYTR QRSQRNSPFK RRKLFGQSSV LTSEGGISNV 360 GISKSPEKGV DGDPAGAASR ASSSVSGKKS SFQSRDSHVK LSIKSFRVPE LFIEIPETAT 420 VGSLKRTVME AVTAILGGGL RVGVVLKGNK VRDDNKTLVQ TGISNDEKLD NLGFTLEPNP 480 THAPPPMHPE DPSFPVPCDT PHPVTRYPTT PALDSGMSDT SLYPPMTDLG NFIESDHDSV 540 PSPTDSSADK TSQDSRALVA IPTMSMDALA VVPLHRKPRR SELVQRRIRR PFSVSEVEAL 600 VQAVEKLGTG RWRDVKLRAF DNAKHRTYVD LKDKWKTLVH TARISPQQRR GEPVPQELLD 660 RVLSAHAYWS QQQAKQQVKQ QNETCLLL

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

MVLQKRLDYG FNGYQVPAIP RASRSARGRR GSFRQKVEDK QMCAFELLAT VAGKLLQEKE  60
SSSDSSNASP GRSQQAIVKD NVKQEQQYEE KVFKVEPNEQ GSSDETVLVS ELESQGHNQS  120
YSSKDFPIAQ NDVSVGLSSD IDNADQSEKA GCAKTSTANN RNELGKFLKV ERDSPGYGQS  180
CEVRVVDRIG RQLEARSHKI GNLINGTVRD TFCSEDLMEL DNKPPALVGS DSSIEVPKCK  240
DNHIPRGSFP GFRDDEKVVS RDDDENSSGC TQPSTRNMKA FRPSPRLGDR RIRKLLASKY  300
WKVAPKLKDR EHSRTDMKLI FHNRKTCYTR QRSQRNSPFK RRKLFGQSSV LTSEGGISNV  360
GISKSPEKGV DGDPAGAASR ASSSVSGKKS SFQSRDSHVK LSIKSFRVPE LFIEIPETAT  420
VGSLKRTVME AVTAILGGGL RVGVVLKGNK VRDDNKTLVQ TGISNDEKLD NLGFTLEPNP  480
THAPPPMHPE DPSFPVPCDT PHPVTRYPTT PALDSGMSDT SLYPPMTDLG NFIESDHDSV  540
PSPTDSSADK TSQDSRALVA IPTMSMDALA VVPLHRKPRR SELVQRRIRR PFSVSEVEAL  600
VQAVEKLGTG RWRDVKLRAF DNAKHRTYVD LKDKWKTLVH TARISPQQRR GEPVPQELLD  660
RVLSAHAYWS QQQAKQQVKQ QNETCLLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	289	295	DRRIRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-118	MYB_related family protein