PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16504.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 524aa MW: 57667.8 Da PI: 8.4781

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16504.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.5	6.5e-18	47	93	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av ++ g++Wk+Ia++++ R++ qc +rwqk+l OVA16504.1 47 KGGWTPEEDEKLRQAVGKFKGRRWKRIAEYFP-DRSEVQCLHRWQKVL 93 688***************************.**********986 PP
2	Myb_DNA-binding	59	1e-18	99	145	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++++++v ++G+ W+ Ia+ ++ gR +kqc++rw+++l OVA16504.1 99 KGPWTQEEDDKIIELVSRYGPAKWSVIAKSLP-GRIGKQCRERWHNHL 145 79****************************.***********97 PP
3	Myb_DNA-binding	56.7	5.6e-18	151	194	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r++WT eE++ l +a++ +G++ W+ Ia+ ++ gRt++++k++w++ OVA16504.1 151 RDAWTLEEELALMNAHHVHGNK-WAEIAKVLP-GRTDNSIKNHWNS 194 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MAEMKSEQCC FENKQSTANS SSSVSEESCS VSLKPNRRTS GPIRRAKGGW TPEEDEKLRQ 60 AVGKFKGRRW KRIAEYFPDR SEVQCLHRWQ KVLNPDLVKG PWTQEEDDKI IELVSRYGPA 120 KWSVIAKSLP GRIGKQCRER WHNHLNPVIK RDAWTLEEEL ALMNAHHVHG NKWAEIAKVL 180 PGRTDNSIKN HWNSSLRKKL DFYLVTGQLP PVPKTEEDGA KDISKPVAAG NFGICYNEGF 240 NSTAQCSSGI ADMCELEEDC KDQVQSSTPQ LLDRDAPTGV LVTGSSKNDG IECKQLSSEC 300 DFSCTKSIST PNSVKCRSSG EADLENNISG TPLPIAVPAF GSLYHETFDS NSVLSPSSFL 360 TPPCIKSTGL GGAQSAESIL KNAAKSFPNT PSILRKRKRE ACGPNKNEQT DGVKVKDSLG 420 ITEGKKITEN SQEQPGSLDA LKCESPARHG SSTVGLYTGQ AFDPSPSYRL RSKRTAILKS 480 LEKQLEFTFD GDNTDSQSKS MNSAVRGSSR LTKDCPRTMK MGVT

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MAEMKSEQCC FENKQSTANS SSSVSEESCS VSLKPNRRTS GPIRRAKGGW TPEEDEKLRQ  60
AVGKFKGRRW KRIAEYFPDR SEVQCLHRWQ KVLNPDLVKG PWTQEEDDKI IELVSRYGPA  120
KWSVIAKSLP GRIGKQCRER WHNHLNPVIK RDAWTLEEEL ALMNAHHVHG NKWAEIAKVL  180
PGRTDNSIKN HWNSSLRKKL DFYLVTGQLP PVPKTEEDGA KDISKPVAAG NFGICYNEGF  240
NSTAQCSSGI ADMCELEEDC KDQVQSSTPQ LLDRDAPTGV LVTGSSKNDG IECKQLSSEC  300
DFSCTKSIST PNSVKCRSSG EADLENNISG TPLPIAVPAF GSLYHETFDS NSVLSPSSFL  360
TPPCIKSTGL GGAQSAESIL KNAAKSFPNT PSILRKRKRE ACGPNKNEQT DGVKVKDSLG  420
ITEGKKITEN SQEQPGSLDA LKCESPARHG SSTVGLYTGQ AFDPSPSYRL RSKRTAILKS  480
LEKQLEFTFD GDNTDSQSKS MNSAVRGSSR LTKDCPRTMK MGVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-139	MYB family protein