PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16488.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

G2-like

Protein Properties

Length: 401aa MW: 44974.9 Da PI: 6.7846

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16488.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.4	3.9e-34	27	81	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rF+eav+qLGG++kAtPkti++lm+v+gLtl+h+kSHLQkYRl OVA16488.1 27 KPRLKWTPELHQRFIEAVNQLGGADKATPKTIMKLMGVPGLTLYHLKSHLQKYRL 81 79****************************************************8 PP
2	Myb_DNA-binding	68.2	1.4e-21	29	80	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e+++++++av+qlGg t+ktI++ mg g+tl+++ks++qky+ OVA16488.1 29 RLKWTPELHQRFIEAVNQLGGAdkaTPKTIMKLMGvPGLTLYHLKSHLQKYR 80 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MYHHHHHLFM RGNGIADTGL VLSTDAKPRL KWTPELHQRF IEAVNQLGGA DKATPKTIMK 60 LMGVPGLTLY HLKSHLQKYR LSKNLQGQAS NGGINKIGCT AMVAEDRMSE VSGALMSNTN 120 LGSQTNKNLQ ISEAIQMQIE VQRRLHEQLE VQRHLQLRIE AQGKYLQSVL EKAQETLGRQ 180 NLSPTGLDAA KVQLTELVSK VSADCLNSSF SLLKEQPGLC NAQTQTMQPA DCSMDSCLTI 240 CEGSQKDQDM QNVGMGLRPY DGNAPLTQKE TREFRLEQSE PTWCDDLNEN KKFSLSIERD 300 LESMMFPVKG SFSDLSMGIR VHGEKKSNSR CILEARPKER DEDDNFLDQS NNRKTAIHLE 360 NEKKSKVLLP YVTAELDLND QDKNDAASSC KQFDLNGLSW S

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MYHHHHHLFM RGNGIADTGL VLSTDAKPRL KWTPELHQRF IEAVNQLGGA DKATPKTIMK  60
LMGVPGLTLY HLKSHLQKYR LSKNLQGQAS NGGINKIGCT AMVAEDRMSE VSGALMSNTN  120
LGSQTNKNLQ ISEAIQMQIE VQRRLHEQLE VQRHLQLRIE AQGKYLQSVL EKAQETLGRQ  180
NLSPTGLDAA KVQLTELVSK VSADCLNSSF SLLKEQPGLC NAQTQTMQPA DCSMDSCLTI  240
CEGSQKDQDM QNVGMGLRPY DGNAPLTQKE TREFRLEQSE PTWCDDLNEN KKFSLSIERD  300
LESMMFPVKG SFSDLSMGIR VHGEKKSNSR CILEARPKER DEDDNFLDQS NNRKTAIHLE  360
NEKKSKVLLP YVTAELDLND QDKNDAASSC KQFDLNGLSW S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-135	G2-like family protein