PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA16474.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 184aa    MW: 20921 Da    PI: 8.4713
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA16474.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF66.13.4e-21350249
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                +i++k   qvtfskRrng++KKA+EL++LC+ae a++++s+ gk + +
  OVA16474.1  3 KIKSKDYLQVTFSKRRNGLFKKASELCTLCGAETAIVLYSPAGKAFSF 50
                79999999***********************************97766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MEKIKSKDYL QVTFSKRRNG LFKKASELCT LCGAETAIVL YSPAGKAFSF GHPCVESTMD  60
KFLATASLIE IGKSSLGVHS FPDYHRNIGI NKLNRHINEL VNQLEAEKKY GESFTQMEMA  120
NKDQFLWNKP IKNLEFHELE QLRVSMEELK IKMVNRTEGL KRASMLSSSI DINQVGRTED  180
EGVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.15e-35M-type_MADS family protein