PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA15860.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 582aa MW: 64030 Da PI: 7.1667

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA15860.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	52.1	1.2e-16	383	429	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq OVA15860.1 383 VHNLSERRRRDRINEKMKALQELIPHC-----NKSDKASMLDEAIEYLKSLQ 429 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MGCFGNFDFV VALKLGIEPF NRFDDPLQYL TALVSFLTKL SSLLFFYFLS FRLDHELVEL 60 LWHNGQVVLH SQTHRKPSPI SNELGQIQKS DRQTTKGGGS FGNFGSLIQE DETASWIQYP 120 LEDSLEKEFF PNFYCELPNS HPIEAEKPIK QYEGDKNVSF GASEETNVLF TGSTVRSQQP 180 GFKQSNNVTL VQNPMPPPQL KIPDPAPQDP TVEGTDKIVN FSHFSRPIKA ELGSSNGRTI 240 GKGSVNVTRG DVGESSVMTI GSSHCGSNQV TNDADFSRVS SNALGTAGLF TGPMKEDFQK 300 LFPHGERGGT ETLEPTVTSS SGGSGGSFGG TGKQSNSTHS HKRKGRDADE SECPSEDAEF 360 ESAEAKKPPQ RSGSNRRSRA AEVHNLSERR RRDRINEKMK ALQELIPHCN KSDKASMLDE 420 AIEYLKSLQL QVQLMWMGSG MAPMIFPGVQ HYLSRMGMGM GPPPLPSMHN PMQLPRVPLV 480 DQAISSATTP NQPAMCPPAI LNPVNFQNQM QNPNFAEPYA RYMGFHHMQA AQPMNIFNYG 540 SQTVQQSQKI GLNGLPCHGG APSGHTPSNL RRMGCLFLKN HP

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MGCFGNFDFV VALKLGIEPF NRFDDPLQYL TALVSFLTKL SSLLFFYFLS FRLDHELVEL  60
LWHNGQVVLH SQTHRKPSPI SNELGQIQKS DRQTTKGGGS FGNFGSLIQE DETASWIQYP  120
LEDSLEKEFF PNFYCELPNS HPIEAEKPIK QYEGDKNVSF GASEETNVLF TGSTVRSQQP  180
GFKQSNNVTL VQNPMPPPQL KIPDPAPQDP TVEGTDKIVN FSHFSRPIKA ELGSSNGRTI  240
GKGSVNVTRG DVGESSVMTI GSSHCGSNQV TNDADFSRVS SNALGTAGLF TGPMKEDFQK  300
LFPHGERGGT ETLEPTVTSS SGGSGGSFGG TGKQSNSTHS HKRKGRDADE SECPSEDAEF  360
ESAEAKKPPQ RSGSNRRSRA AEVHNLSERR RRDRINEKMK ALQELIPHCN KSDKASMLDE  420
AIEYLKSLQL QVQLMWMGSG MAPMIFPGVQ HYLSRMGMGM GPPPLPSMHN PMQLPRVPLV  480
DQAISSATTP NQPAMCPPAI LNPVNFQNQM QNPNFAEPYA RYMGFHHMQA AQPMNIFNYG  540
SQTVQQSQKI GLNGLPCHGG APSGHTPSNL RRMGCLFLKN HP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	388	393	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43010.2	9e-47	bHLH family protein