PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA14775.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 495aa MW: 55949.4 Da PI: 4.8159

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA14775.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.6	4.7e-13	287	338	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++ + a+i A++++k+L+ OVA14775.1 287 QRMTHIAVERNRRRQMNDHLNALRSLMPPS---FIQRGDQASIIGGAIDFVKELE 338 79*************************9...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MEKFQGPTNQ CLFGASLDVE RGLEQGQSGF VFSYGAPFLN TTGSFRFQEE DQQQNLQQQQ 60 EEESLQQSFS LSIPLGLEDK MPFLEMLQSE ESPPYSPFAE PPPPPDFQVL LTSQYQQQQQ 120 RKPCGVERRY LSSESAMDYS RRMQAAALEL ESCITTTTNH NDMASESYSP VKSETNKEQE 180 QEEQACPPNY SSSSHPVEVV SSSLCCNGEL FGEPPNSSPE ENCRRGVSSS TTCCWVGSRP 240 KMTTTTKLAK PEPAARVVTT TTNGRERERK KRKRTRPSKN REEVESQRMT HIAVERNRRR 300 QMNDHLNALR SLMPPSFIQR GDQASIIGGA IDFVKELEQL LQSLEAKNIM RLSSSEEEEE 360 EEGTQGYKKY YKKNKRRSSN SSSDYSMMNK EEEEEEEEEV MKCVVGADIE VIVVQTHVNL 420 KILTPRRPGQ LLRAIAALED LRLTILHLNV TSFQLSVLYS LNLKIEDDCR LGTSADEIAT 480 AVHQIFSYIN GGGDN

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MEKFQGPTNQ CLFGASLDVE RGLEQGQSGF VFSYGAPFLN TTGSFRFQEE DQQQNLQQQQ  60
EEESLQQSFS LSIPLGLEDK MPFLEMLQSE ESPPYSPFAE PPPPPDFQVL LTSQYQQQQQ  120
RKPCGVERRY LSSESAMDYS RRMQAAALEL ESCITTTTNH NDMASESYSP VKSETNKEQE  180
QEEQACPPNY SSSSHPVEVV SSSLCCNGEL FGEPPNSSPE ENCRRGVSSS TTCCWVGSRP  240
KMTTTTKLAK PEPAARVVTT TTNGRERERK KRKRTRPSKN REEVESQRMT HIAVERNRRR  300
QMNDHLNALR SLMPPSFIQR GDQASIIGGA IDFVKELEQL LQSLEAKNIM RLSSSEEEEE  360
EEGTQGYKKY YKKNKRRSSN SSSDYSMMNK EEEEEEEEEV MKCVVGADIE VIVVQTHVNL  420
KILTPRRPGQ LLRAIAALED LRLTILHLNV TSFQLSVLYS LNLKIEDDCR LGTSADEIAT  480
AVHQIFSYIN GGGDN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	265	274	RERERKKRKR
2	269	274	RKKRKR
3	270	275	KKRKRT
4	288	299	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	5e-53	bHLH family protein