PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA14033.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 675aa MW: 75522.3 Da PI: 5.2281

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA14033.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.6	5.3e-09	484	523	11	55
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rRR+++N++f Lr+l+P+ kK + a+iL +++Y+k+L+ OVA14033.1 484 RRREELNEKFIVLRSLVPSV-----KKFDQASILSDTIDYLKELE 523 8****************8.....8**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 675 aa Download sequence
MATGLQKQEG VPENHLKQQL AVAVRSIQWS YAIFWTISTR NQGVLEWGAG YYNGDIKTRK 60 TVQPMEFNAN QLGLQRSEQL RELYESLSVG ETNQQARRPS ASLSPEDLSD AEWYYLVCMS 120 FTFNPGQGLP GRALANGQHI WLCEAHCADS KVFIRSLLAK VGTVVCFPFL GGVVELGVTE 180 LVPEDLTLLQ HVKTVFLEFK KPSCSDKSTS SPRNGDKNDE DPVGTEIGHE IADTMALNQQ 240 NTVAECEIQP LPFNLPHSSP KEEIELDQNG IKELNTNIRE NLIADSPEDS SNGCEPNQQT 300 EDSYMMDGVN GGASQVQSWQ FMDDELELSN GIHGSMNSSD CISQTFLNPE KAFSSSKLKK 360 INNLQGLQEC NHTKLSELDL GTDDLHYSRT LSAIFKTTNL LIVAPCSRSC NKKSSFGSWK 420 KGSLVDYSHK LRSQTGTQQK LLKKILFEVA WMHSGCSLKT REEKEIKNGI WKPEGDDIGL 480 GHERRREELN EKFIVLRSLV PSVKKFDQAS ILSDTIDYLK ELERRVEELE SCRELTESEA 540 RDRRKHPDIV ERTSDNYGIA NGKKPVINKR KACDIDEVEP EQNWVLPKDT GLATYVTVCM 600 IEKEILIEIS CPWRECLLLE IMDAISDLHL DAHSVQSSNA DGVLTLNLKS KFKGAAGVAS 660 AGMIKQAIQR VISKF

Sequence ? help Back to Top

Protein Sequence Length: 675 aa Download sequence

MATGLQKQEG VPENHLKQQL AVAVRSIQWS YAIFWTISTR NQGVLEWGAG YYNGDIKTRK  60
TVQPMEFNAN QLGLQRSEQL RELYESLSVG ETNQQARRPS ASLSPEDLSD AEWYYLVCMS  120
FTFNPGQGLP GRALANGQHI WLCEAHCADS KVFIRSLLAK VGTVVCFPFL GGVVELGVTE  180
LVPEDLTLLQ HVKTVFLEFK KPSCSDKSTS SPRNGDKNDE DPVGTEIGHE IADTMALNQQ  240
NTVAECEIQP LPFNLPHSSP KEEIELDQNG IKELNTNIRE NLIADSPEDS SNGCEPNQQT  300
EDSYMMDGVN GGASQVQSWQ FMDDELELSN GIHGSMNSSD CISQTFLNPE KAFSSSKLKK  360
INNLQGLQEC NHTKLSELDL GTDDLHYSRT LSAIFKTTNL LIVAPCSRSC NKKSSFGSWK  420
KGSLVDYSHK LRSQTGTQQK LLKKILFEVA WMHSGCSLKT REEKEIKNGI WKPEGDDIGL  480
GHERRREELN EKFIVLRSLV PSVKKFDQAS ILSDTIDYLK ELERRVEELE SCRELTESEA  540
RDRRKHPDIV ERTSDNYGIA NGKKPVINKR KACDIDEVEP EQNWVLPKDT GLATYVTVCM  600
IEKEILIEIS CPWRECLLLE IMDAISDLHL DAHSVQSSNA DGVLTLNLKS KFKGAAGVAS  660
AGMIKQAIQR VISKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-153	bHLH family protein