PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13505.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 780aa MW: 85325 Da PI: 8.8474

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13505.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.5	3.6e-16	487	533	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq OVA13505.1 487 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 533 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 780 aa Download sequence
MPNSELHRIA KGTTALESTQ TRMANCSADL AFPPDNEFLE LVCENGQILM QGQSSRNRKN 60 LSCTGFSSPI SKAQEKDGGD AVTPKIGRFG HMDAVLNDFS SSGTSGHMGL GQDDDIVPWL 120 NYPLDDTLQH DYCSDFFSEL TGVNLNVLSS SQNNVVPFDK NSSYSQMVRD SHLASVHAVA 180 NPQQRNMSKI DDEGGPEPTR PRPSHQFYPS QLKEFQTSIP SLRPRVSDFI SCNSNNTQQA 240 APCRNSSQTS AGSQPAKTKM QKQDQGSTRP PQQPNNSGLM NFSHFSRPAA LVKANLQSIS 300 VAPSPGLSSL DRLRSNDKIS AVSSSNPVES TLIDLTSGSR SVTGFQNQPV RMAGKVDIER 360 STSKPSKELL STEQSGAICR DDASRITRLP DQILRQTSSF AASTTIGRPD TEKNIEPLVA 420 SSSMCSGNSA GGASNDLKHI LKRKSREADE SEYQSEDVEE ESGSGRKTAN TRGAIGAGAK 480 RSRAAEVHNL SERRRRDRIN EKMRALQELI PNCNKVDKAS MLDEAIEYLK TLQLQVQIMS 540 MGTGLYMPPM MLPTGMQRMP GQHLPHFPPM GVGMGMGMGI GMGFGMGMLD MSSGSSMMQV 600 PPMHSVQFPC PPLSGPNSFP PMPGSSLQMF GLPGQGHPMP MPRAPYIPPS EGTFTKSVPL 660 PDVSGTATPE IPGSASSSSS KDPIQNVNSQ MMHNTNAECS QNQTSKTMQH HLQTSTLHDP 720 RQLPSITRRS FESILHQSIN FYFLPTARQQ QKVLNSPPWR KEMIKPFTWR QRKHQLFQRK

Sequence ? help Back to Top

Protein Sequence Length: 780 aa Download sequence

MPNSELHRIA KGTTALESTQ TRMANCSADL AFPPDNEFLE LVCENGQILM QGQSSRNRKN  60
LSCTGFSSPI SKAQEKDGGD AVTPKIGRFG HMDAVLNDFS SSGTSGHMGL GQDDDIVPWL  120
NYPLDDTLQH DYCSDFFSEL TGVNLNVLSS SQNNVVPFDK NSSYSQMVRD SHLASVHAVA  180
NPQQRNMSKI DDEGGPEPTR PRPSHQFYPS QLKEFQTSIP SLRPRVSDFI SCNSNNTQQA  240
APCRNSSQTS AGSQPAKTKM QKQDQGSTRP PQQPNNSGLM NFSHFSRPAA LVKANLQSIS  300
VAPSPGLSSL DRLRSNDKIS AVSSSNPVES TLIDLTSGSR SVTGFQNQPV RMAGKVDIER  360
STSKPSKELL STEQSGAICR DDASRITRLP DQILRQTSSF AASTTIGRPD TEKNIEPLVA  420
SSSMCSGNSA GGASNDLKHI LKRKSREADE SEYQSEDVEE ESGSGRKTAN TRGAIGAGAK  480
RSRAAEVHNL SERRRRDRIN EKMRALQELI PNCNKVDKAS MLDEAIEYLK TLQLQVQIMS  540
MGTGLYMPPM MLPTGMQRMP GQHLPHFPPM GVGMGMGMGI GMGFGMGMLD MSSGSSMMQV  600
PPMHSVQFPC PPLSGPNSFP PMPGSSLQMF GLPGQGHPMP MPRAPYIPPS EGTFTKSVPL  660
PDVSGTATPE IPGSASSSSS KDPIQNVNSQ MMHNTNAECS QNQTSKTMQH HLQTSTLHDP  720
RQLPSITRRS FESILHQSIN FYFLPTARQQ QKVLNSPPWR KEMIKPFTWR QRKHQLFQRK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	492	497	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	3e-44	bHLH family protein