PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13302.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Whirly

Protein Properties

Length: 277aa MW: 30900.2 Da PI: 10.0577

Description

Whirly family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13302.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Whirly	209.5	3.6e-65	98	236	1	139
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePl 99 s+yk+kaal+v+++ p+f+ ldsg++kl+++G++ll++a+a+++r+ydW++kq+f+ls+te+++l+ l++++sceffhdp++++s+eGkvrk+lk ePl OVA13302.1 98 SIYKGKAALTVEPKSPEFVPLDSGAFKLSKEGFVLLQFAPAVGVRQYDWNRKQVFSLSVTEIGTLMGLGPRDSCEFFHDPFKGKSEEGKVRKVLKAEPL 196 7************************************************************************************************ PP Whirly 100 pdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139 pdGsG+f+nl+v+n+l++++e++++P++kae +vl+s+++ OVA13302.1 197 PDGSGHFFNLNVQNKLLNVDENIYIPITKAELTVLISAFN 236 **********************************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MQLLSSRIIL QPPKCPPFPS LKTNNSFSQN PSSSSSSYSS FSSSHTLSAN PPPNRKKFIL 60 KCRGSEYFEK QRFTKPSEET FTPQSLGALP PRVFVGHSIY KGKAALTVEP KSPEFVPLDS 120 GAFKLSKEGF VLLQFAPAVG VRQYDWNRKQ VFSLSVTEIG TLMGLGPRDS CEFFHDPFKG 180 KSEEGKVRKV LKAEPLPDGS GHFFNLNVQN KLLNVDENIY IPITKAELTV LISAFNFIMP 240 YLLGWHTFVN SIKPSDTSRV NNTNTNSRSG ADLEWSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14410.1	1e-112	Whirly family protein