PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA13172.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 451aa    MW: 50778.2 Da    PI: 6.2376
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA13172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS289.31e-88444362373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalkl..fsevsPilkfshl 96 
                 ++lLl+cA a++++d + aq++++ l++ as+ gdp+qRl++ f++AL +r +r + +++  ++ +++++ +   ++++++++l  ++++ P+++f++ 
  OVA13172.1  44 EKLLLHCASALENNDVTFAQQVMWVLNNVASSMGDPNQRLTSWFLRALISRASRVCANTAMNFHGTTSTTLQrsRTRQMSVTELagYVDIIPWHRFGFC 142
                 689***************************************************88888877755555544443566666666699************* PP

        GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl........... 181
                 + N+ Il+a++g+++vHi+Df+i++++QWp+L++aL++Rpegpp lR+T+ +   ++    + ++ee+g rLa+fA++ +vpfef+v+           
  OVA13172.1 143 ASNSSILKAIQGHHKVHILDFSITHCMQWPTLIDALSKRPEGPPLLRLTVPSCRPPVppfLNVSIEEVGLRLANFAKSRDVPFEFKVIngsssksshvs 241
                 *************************************************9776555566899****************************999998654 PP

        GRAS 182 ..vakrledleleeLrvkpgEalaVnlvlqlhrllde...svsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl 275
                    +  l++l+++ L+++ +Eal++n++  l +l+d    +++ +s rd +L+++++l+P++vvvv++++d++ +s+  r++ +++y +  fd+le+ l
  OVA13172.1 242 fnFELLLSQLNPSLLDLRDDEALVINCQNWLRYLPDAlegRTQDPSFRDGFLEIIRGLNPHIVVVVDEDSDLDIPSLKSRITACFNYLWIPFDALETFL 340
                 433335566799*****************999999762114444559**************************************************** PP

        GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 p++s +r+ +E+  +g +i+n++  eg +r er e+  +  +r+++a F++vp+ e+++ ++k ll +++  g+ +++e++ lvl+Wk+++ v+++ W
  OVA13172.1 341 PKDSCQRSEYEAD-IGHKIENMIGFEGLQRMERLESGPRLVQRMKNANFTSVPFCEETVREVKFLLDEHA-SGWGMKKEDEMLVLTWKGHSSVFATTW 436
                 *************.********************************************************.8999**********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    
MKAELRSTTT PVPLPNPNLF DTPQSSLSGA LIGCLGTLDG ACIEKLLLHC ASALENNDVT  60
FAQQVMWVLN NVASSMGDPN QRLTSWFLRA LISRASRVCA NTAMNFHGTT STTLQRSRTR  120
QMSVTELAGY VDIIPWHRFG FCASNSSILK AIQGHHKVHI LDFSITHCMQ WPTLIDALSK  180
RPEGPPLLRL TVPSCRPPVP PFLNVSIEEV GLRLANFAKS RDVPFEFKVI NGSSSKSSHV  240
SFNFELLLSQ LNPSLLDLRD DEALVINCQN WLRYLPDALE GRTQDPSFRD GFLEIIRGLN  300
PHIVVVVDED SDLDIPSLKS RITACFNYLW IPFDALETFL PKDSCQRSEY EADIGHKIEN  360
MIGFEGLQRM ERLESGPRLV QRMKNANFTS VPFCEETVRE VKFLLDEHAS GWGMKKEDEM  420
LVLTWKGHSS VFATTWVPFG CEDYIKRVYV D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-118GRAS family protein