PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA13172.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | GRAS | ||||||||
Protein Properties | Length: 451aa MW: 50778.2 Da PI: 6.2376 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 289.3 | 1e-88 | 44 | 436 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalkl..fsevsPilkfshl 96 ++lLl+cA a++++d + aq++++ l++ as+ gdp+qRl++ f++AL +r +r + +++ ++ +++++ + ++++++++l ++++ P+++f++ OVA13172.1 44 EKLLLHCASALENNDVTFAQQVMWVLNNVASSMGDPNQRLTSWFLRALISRASRVCANTAMNFHGTTSTTLQrsRTRQMSVTELagYVDIIPWHRFGFC 142 689***************************************************88888877755555544443566666666699************* PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl........... 181 + N+ Il+a++g+++vHi+Df+i++++QWp+L++aL++Rpegpp lR+T+ + ++ + ++ee+g rLa+fA++ +vpfef+v+ OVA13172.1 143 ASNSSILKAIQGHHKVHILDFSITHCMQWPTLIDALSKRPEGPPLLRLTVPSCRPPVppfLNVSIEEVGLRLANFAKSRDVPFEFKVIngsssksshvs 241 *************************************************9776555566899****************************999998654 PP GRAS 182 ..vakrledleleeLrvkpgEalaVnlvlqlhrllde...svsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl 275 + l++l+++ L+++ +Eal++n++ l +l+d +++ +s rd +L+++++l+P++vvvv++++d++ +s+ r++ +++y + fd+le+ l OVA13172.1 242 fnFELLLSQLNPSLLDLRDDEALVINCQNWLRYLPDAlegRTQDPSFRDGFLEIIRGLNPHIVVVVDEDSDLDIPSLKSRITACFNYLWIPFDALETFL 340 433335566799*****************999999762114444559**************************************************** PP GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 p++s +r+ +E+ +g +i+n++ eg +r er e+ + +r+++a F++vp+ e+++ ++k ll +++ g+ +++e++ lvl+Wk+++ v+++ W OVA13172.1 341 PKDSCQRSEYEAD-IGHKIENMIGFEGLQRMERLESGPRLVQRMKNANFTSVPFCEETVREVKFLLDEHA-SGWGMKKEDEMLVLTWKGHSSVFATTW 436 *************.********************************************************.8999**********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 451 aa Download sequence |
MKAELRSTTT PVPLPNPNLF DTPQSSLSGA LIGCLGTLDG ACIEKLLLHC ASALENNDVT 60 FAQQVMWVLN NVASSMGDPN QRLTSWFLRA LISRASRVCA NTAMNFHGTT STTLQRSRTR 120 QMSVTELAGY VDIIPWHRFG FCASNSSILK AIQGHHKVHI LDFSITHCMQ WPTLIDALSK 180 RPEGPPLLRL TVPSCRPPVP PFLNVSIEEV GLRLANFAKS RDVPFEFKVI NGSSSKSSHV 240 SFNFELLLSQ LNPSLLDLRD DEALVINCQN WLRYLPDALE GRTQDPSFRD GFLEIIRGLN 300 PHIVVVVDED SDLDIPSLKS RITACFNYLW IPFDALETFL PKDSCQRSEY EADIGHKIEN 360 MIGFEGLQRM ERLESGPRLV QRMKNANFTS VPFCEETVRE VKFLLDEHAS GWGMKKEDEM 420 LVLTWKGHSS VFATTWVPFG CEDYIKRVYV D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49950.1 | 1e-118 | GRAS family protein |