PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA13118.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 472aa    MW: 52340.6 Da    PI: 5.9946
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA13118.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS404.79e-124464711373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaal.................. 81 
                 +++lL++cAe vs+ d+++a++l++ ls+++sp+gd++ Rl++ f +AL+ r++r+  + + + ++s+++      + +a+                  
  OVA13118.1  46 MRQLLISCAELVSQADFSAAHRLVSLLSTTSSPYGDSTDRLVHQFSRALSLRINRHYRNNFVTTSSSAAA-----ASGNAMipfaahhhpdatiiispa 139
                 589****************************************************433333333222222.....22222223345678999******* PP

        GRAS  82 ....................klfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeel 158
                                       +++++P+++fshltaNqaIlea+eg++ +Hi+Dfd + G+QWp+L+qa+a+R+  ++pp++RiTg g+    + ++l
  OVA13118.1 140 sgggaaaggpselealqssyLSLNQITPFIRFSHLTANQAILEAIEGQQSIHILDFDTMLGVQWPPLMQAIAERSdpSNPPMIRITGAGQ----DLDTL 234
                 *************999876444****************************************************98888***********....***** PP

        GRAS 159 eetgerLakfAeelgvpfefnvl.....vakrledleleeLrvkpgEalaVnlvlqlhrll................desvsleserdevLklvkslsP 236
                  +tgerL+kfAe+lg++f+f++l       ++l+   +++ ++ p+E+laVn+vl lhr+l                ++s s ++  + +L+++k ++P
  OVA13118.1 235 CRTGERLQKFAESLGLRFQFHPLllllnDPSNLALHLPSAVALLPDETLAVNCVLYLHRILrdddvgssnkqyssstSSSSSRDEDLRLFLRTIKAMNP 333
                 **********************97753333366666778889999****************************9886555555557899********** PP

        GRAS 237 kvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaak 335
                 kvv+v+e+ea+ n+++Fl+rf+eal++y+alfdsle +lp++s+er +vE++++greiv++v++eg+errerhe+le+W e+l+++GF++vpls +a +
  OVA13118.1 334 KVVTVAEREANNNHPNFLQRFVEALDHYTALFDSLEGTLPPNSRERLSVEQVWFGREIVDIVSAEGEERRERHEKLESWAEKLTSSGFRNVPLSPFALS 432
                 *************************************************************************************************** PP

        GRAS 336 qaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                 qaklllr ++ s+gy+++  +++++lgW++++L++vS+W
  OVA13118.1 433 QAKLLLRLHYpSEGYQLQILNDTFFLGWQNQSLFTVSSW 471
                 *************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MLSSSLSTTG SHDQEEDDST DHNHSYQNNP ALPPGRQFPS TPVTHMRQLL ISCAELVSQA  60
DFSAAHRLVS LLSTTSSPYG DSTDRLVHQF SRALSLRINR HYRNNFVTTS SSAAAASGNA  120
MIPFAAHHHP DATIIISPAS GGGAAAGGPS ELEALQSSYL SLNQITPFIR FSHLTANQAI  180
LEAIEGQQSI HILDFDTMLG VQWPPLMQAI AERSDPSNPP MIRITGAGQD LDTLCRTGER  240
LQKFAESLGL RFQFHPLLLL LNDPSNLALH LPSAVALLPD ETLAVNCVLY LHRILRDDDV  300
GSSNKQYSSS TSSSSSRDED LRLFLRTIKA MNPKVVTVAE REANNNHPNF LQRFVEALDH  360
YTALFDSLEG TLPPNSRERL SVEQVWFGRE IVDIVSAEGE ERRERHEKLE SWAEKLTSSG  420
FRNVPLSPFA LSQAKLLLRL HYPSEGYQLQ ILNDTFFLGW QNQSLFTVSS WF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-120GRAS family protein