PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA13118.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | GRAS | ||||||||
Protein Properties | Length: 472aa MW: 52340.6 Da PI: 5.9946 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 404.7 | 9e-124 | 46 | 471 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaal.................. 81 +++lL++cAe vs+ d+++a++l++ ls+++sp+gd++ Rl++ f +AL+ r++r+ + + + ++s+++ + +a+ OVA13118.1 46 MRQLLISCAELVSQADFSAAHRLVSLLSTTSSPYGDSTDRLVHQFSRALSLRINRHYRNNFVTTSSSAAA-----ASGNAMipfaahhhpdatiiispa 139 589****************************************************433333333222222.....22222223345678999******* PP GRAS 82 ....................klfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeel 158 +++++P+++fshltaNqaIlea+eg++ +Hi+Dfd + G+QWp+L+qa+a+R+ ++pp++RiTg g+ + ++l OVA13118.1 140 sgggaaaggpselealqssyLSLNQITPFIRFSHLTANQAILEAIEGQQSIHILDFDTMLGVQWPPLMQAIAERSdpSNPPMIRITGAGQ----DLDTL 234 *************999876444****************************************************98888***********....***** PP GRAS 159 eetgerLakfAeelgvpfefnvl.....vakrledleleeLrvkpgEalaVnlvlqlhrll................desvsleserdevLklvkslsP 236 +tgerL+kfAe+lg++f+f++l ++l+ +++ ++ p+E+laVn+vl lhr+l ++s s ++ + +L+++k ++P OVA13118.1 235 CRTGERLQKFAESLGLRFQFHPLllllnDPSNLALHLPSAVALLPDETLAVNCVLYLHRILrdddvgssnkqyssstSSSSSRDEDLRLFLRTIKAMNP 333 **********************97753333366666778889999****************************9886555555557899********** PP GRAS 237 kvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaak 335 kvv+v+e+ea+ n+++Fl+rf+eal++y+alfdsle +lp++s+er +vE++++greiv++v++eg+errerhe+le+W e+l+++GF++vpls +a + OVA13118.1 334 KVVTVAEREANNNHPNFLQRFVEALDHYTALFDSLEGTLPPNSRERLSVEQVWFGREIVDIVSAEGEERRERHEKLESWAEKLTSSGFRNVPLSPFALS 432 *************************************************************************************************** PP GRAS 336 qaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373 qaklllr ++ s+gy+++ +++++lgW++++L++vS+W OVA13118.1 433 QAKLLLRLHYpSEGYQLQILNDTFFLGWQNQSLFTVSSW 471 *************************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 472 aa Download sequence |
MLSSSLSTTG SHDQEEDDST DHNHSYQNNP ALPPGRQFPS TPVTHMRQLL ISCAELVSQA 60 DFSAAHRLVS LLSTTSSPYG DSTDRLVHQF SRALSLRINR HYRNNFVTTS SSAAAASGNA 120 MIPFAAHHHP DATIIISPAS GGGAAAGGPS ELEALQSSYL SLNQITPFIR FSHLTANQAI 180 LEAIEGQQSI HILDFDTMLG VQWPPLMQAI AERSDPSNPP MIRITGAGQD LDTLCRTGER 240 LQKFAESLGL RFQFHPLLLL LNDPSNLALH LPSAVALLPD ETLAVNCVLY LHRILRDDDV 300 GSSNKQYSSS TSSSSSRDED LRLFLRTIKA MNPKVVTVAE REANNNHPNF LQRFVEALDH 360 YTALFDSLEG TLPPNSRERL SVEQVWFGRE IVDIVSAEGE ERRERHEKLE SWAEKLTSSG 420 FRNVPLSPFA LSQAKLLLRL HYPSEGYQLQ ILNDTFFLGW QNQSLFTVSS WF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G55580.1 | 1e-120 | GRAS family protein |