PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA13106.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | NF-YA | ||||||||
Protein Properties | Length: 181aa MW: 20436 Da PI: 8.2378 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 106.9 | 1.7e-33 | 98 | 154 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e+e+kl k+rkpylheSRh hAlrR+Rg+gGrF OVA13106.1 98 EEPVYVNAKQYHGILRRRQSRAKAESENKL-LKCRKPYLHESRHLHALRRARGCGGRF 154 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MFPDNNSGVD EQQIQSEPRT GHQCPTTEIF HPGIASPCAE CIMMPPHPEV GHVMAQAAYT 60 YPGPYYRSIF SHYGPQSMIH PHLVGIRQPV PLPSDTVEEP VYVNAKQYHG ILRRRQSRAK 120 AESENKLLKC RKPYLHESRH LHALRRARGC GGRFLNGKTN ENERSEAASQ DKAQLDQIVT 180 D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 3e-50 | NF-YA family protein |