PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13016.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 542aa MW: 57680.4 Da PI: 4.8017

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13016.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.4	9.1e-12	321	366	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR++i +++ +L+el+P++ K +Ka++L + +eY+k Lq OVA13016.1 321 HSIAERLRREKISERMKNLQELVPNS-----NKADKASMLDEIIEYVKFLQ 366 99*********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MDEFIDQFFS SSSWSDVSAT ERSSWVGSGP AERDGLLPDT MGTYEEDEKN LPRNSIPSSH 60 VIERFATVAS YDIDKDLFIE EPQSQEEVLD HDRQPLLVGE VVNGNLKAGY MGLQSNMCPS 120 TLGTQNSSSP ELLPVLGGSA NSPSAPPESG SVGSNDTETS GIHPSIGESH SFTSIPQIWP 180 TPSYGGVSSL SPVLGQDKLQ GFGLQGEYVD ADVNVFGNRY LGDDKNLQMG NLHASISAQE 240 GLCNLGLPAF AASHQIPLPR TAGLHSQLQL SQLSEGNTAM HFADQTLVSQ PPHSSVTAGG 300 GCNGAVKPRV RARRGQATDP HSIAERLRRE KISERMKNLQ ELVPNSNKAD KASMLDEIIE 360 YVKFLQLQVK VLSMSRLGAA GAVVPLITEG QAEGSAGLLL SPSTGQGGDH FESPEDIAFE 420 EEVVKLMESN VTAAMQYLQT KGLCLMPIAL AAAISSRKAS LSPDSADRKK PNFTNGLLPQ 480 NNGPPGIPTT GQILANGKTV VKENGVGFHK QQDIATNGCN GGVVKHEEAA ISFGTRELKP 540 KE

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MDEFIDQFFS SSSWSDVSAT ERSSWVGSGP AERDGLLPDT MGTYEEDEKN LPRNSIPSSH  60
VIERFATVAS YDIDKDLFIE EPQSQEEVLD HDRQPLLVGE VVNGNLKAGY MGLQSNMCPS  120
TLGTQNSSSP ELLPVLGGSA NSPSAPPESG SVGSNDTETS GIHPSIGESH SFTSIPQIWP  180
TPSYGGVSSL SPVLGQDKLQ GFGLQGEYVD ADVNVFGNRY LGDDKNLQMG NLHASISAQE  240
GLCNLGLPAF AASHQIPLPR TAGLHSQLQL SQLSEGNTAM HFADQTLVSQ PPHSSVTAGG  300
GCNGAVKPRV RARRGQATDP HSIAERLRRE KISERMKNLQ ELVPNSNKAD KASMLDEIIE  360
YVKFLQLQVK VLSMSRLGAA GAVVPLITEG QAEGSAGLLL SPSTGQGGDH FESPEDIAFE  420
EEVVKLMESN VTAAMQYLQT KGLCLMPIAL AAAISSRKAS LSPDSADRKK PNFTNGLLPQ  480
NNGPPGIPTT GQILANGKTV VKENGVGFHK QQDIATNGCN GGVVKHEEAA ISFGTRELKP  540
KE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	3e-59	bHLH family protein