PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12783.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

ARF

Protein Properties

Length: 963aa MW: 107621 Da PI: 6.4424

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12783.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.6	1.3e-24	127	228	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l OVA12783.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQL 221 99***************************8544444..48********************************************..8899999 PP EEEEE-S CS B3 93 vvkvfrk 99 +++++r+ OVA12783.1 222 LLGIRRA 228 **997 PP
2	Auxin_resp	117.1	1.5e-38	253	336	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+++YnPras++eFv+++ k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWp S+Wrs+k OVA12783.1 253 AAHAAATNSRFTIFYNPRASPTEFVIPLTKYAKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPSSHWRSVK 336 79*******************************9789****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 963 aa Download sequence
MRLSSSGFAH QTQEEEKRCL NSELWHACAG PLVSLPAIGS RVVYFPQGHS EQVAASTNKE 60 IDSHIPNYPS LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLSPQEQKDA YLPAELGSPS 120 KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHGNEWKFR 180 HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL 240 SSDSMHIGLL AAAAHAAATN SRFTIFYNPR ASPTEFVIPL TKYAKAVYHT RVSVGMRFRM 300 LFETEESSVR RYMGTITGIS DLDPVRWPSS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT 360 TFPMYPSSFP LRLKRPWPAG LPNPLGSKDD ELAISSPLMW YRGDGADRGI ESLNFQGIGV 420 TPWMQPRLDT SLLGLQPDMY QAMAAAALQE MRTTDPSKQV AESLLQFPQS QNISVSALMQ 480 RQMLQQSQPQ HTFVQGIQEN QSHTQAQIQA ILQQQLLQSR SFNDQQQQQQ QQQQQQQQQQ 540 QQQQQQQQQQ QQQQQQQQQQ QQQQQQQHQH QQQQQQQQQQ QKQQQQQQQH QQQQQQHQKQ 600 FPVQQQIPNV VSSLSQLVSA PQSQSPSMKT VTSVCQQQNF SGFGGNSMAT SGLSPLHSLL 660 GSFSQNETSQ LLNLPISNPL DPSSTWLPKQ VTVESLVPSG ATQCVLPQVD QLGPQQGNTL 720 QRTISLPPFS GRDSSVDQEG STDPQNNLLF GVNIDSSSLL MQNGMSSLRG VGSECESTNM 780 SFAAANFLSA TSTEYPLNPV MTPSSCIDES DFLPSPENGG QVNPPTRTFV KVHKSGSFGR 840 SLDITRFSSY HELRSELASM FGLEGQLEDP LRSGWQLVFV DRESDVLLLG DDPWQEFVNS 900 VWCIKILSPQ EVHQLGKQGL ELLGSVQIPV QKLSSVSCDD YGSRQDPRNI GNSGITSVGS 960 IDY

Sequence ? help Back to Top

Protein Sequence Length: 963 aa Download sequence

MRLSSSGFAH QTQEEEKRCL NSELWHACAG PLVSLPAIGS RVVYFPQGHS EQVAASTNKE  60
IDSHIPNYPS LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLSPQEQKDA YLPAELGSPS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHGNEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL  240
SSDSMHIGLL AAAAHAAATN SRFTIFYNPR ASPTEFVIPL TKYAKAVYHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDPVRWPSS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSSFP LRLKRPWPAG LPNPLGSKDD ELAISSPLMW YRGDGADRGI ESLNFQGIGV  420
TPWMQPRLDT SLLGLQPDMY QAMAAAALQE MRTTDPSKQV AESLLQFPQS QNISVSALMQ  480
RQMLQQSQPQ HTFVQGIQEN QSHTQAQIQA ILQQQLLQSR SFNDQQQQQQ QQQQQQQQQQ  540
QQQQQQQQQQ QQQQQQQQQQ QQQQQQQHQH QQQQQQQQQQ QKQQQQQQQH QQQQQQHQKQ  600
FPVQQQIPNV VSSLSQLVSA PQSQSPSMKT VTSVCQQQNF SGFGGNSMAT SGLSPLHSLL  660
GSFSQNETSQ LLNLPISNPL DPSSTWLPKQ VTVESLVPSG ATQCVLPQVD QLGPQQGNTL  720
QRTISLPPFS GRDSSVDQEG STDPQNNLLF GVNIDSSSLL MQNGMSSLRG VGSECESTNM  780
SFAAANFLSA TSTEYPLNPV MTPSSCIDES DFLPSPENGG QVNPPTRTFV KVHKSGSFGR  840
SLDITRFSSY HELRSELASM FGLEGQLEDP LRSGWQLVFV DRESDVLLLG DDPWQEFVNS  900
VWCIKILSPQ EVHQLGKQGL ELLGSVQIPV QKLSSVSCDD YGSRQDPRNI GNSGITSVGS  960
IDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.1	0.0	ARF family protein