PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA12448.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 342aa    MW: 37493.4 Da    PI: 7.9542
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA12448.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.92.2e-1399143347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ Iar +   Rt+ q+ s+ qky
       OVA12448.1  99 PWTEEEHRLFLMGLQKLGKGDWRGIARNFVISRTPTQVASHAQKY 143
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPN RGVKLFGVRL IDGSMKKSAS MGNLSSAQFS SAAVSPNPGS  60
PSSDPLRDST PVAGGYVSDD PAHASCSSNC RGERKKGTPW TEEEHRLFLM GLQKLGKGDW  120
RGIARNFVIS RTPTQVASHA QKYFIRQMNA TRRKRRSSLF DMVPDMSIDP PSVPEEPEPF  180
LLHSSQPGEM EHVNLLPPVN LSLDPESEPM EMTSNETPTE EGTFESNNFP SIIPAFYPTY  240
IPIPFPFWPQ NLSVGEEEKG REISRHEILK PIPIFSKDTI NVDELVGMSK LTLGEAATGR  300
IEPSPLTMKL IGAPSRQSAF HANPPVNGSN LSKTKSSAIH AV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.14e-89MYB_related family protein