PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA12437.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 278aa    MW: 31208.5 Da    PI: 4.2101
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA12437.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF33.74.5e-111057249
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                r+++k +r+v fskRr+g++ KA   S   ++ v++i+fs+ g+ +++
  OVA12437.1 10 RVDDKKKRNVHFSKRRKGLFGKAAKFSKDFNVAVSLIVFSPAGRPFTF 57
                6899***************************************98888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGKQKIDIVR VDDKKKRNVH FSKRRKGLFG KAAKFSKDFN VAVSLIVFSP AGRPFTFGPV  60
DDVVDRILGS GYEKSNDQLM GQRVQVEEQR EHWRSELTNI VKQDRSSLEN LQNVDSRLEK  120
LRENILAWMK DASLSPSSSS SNAVTDDNYT VVEAPLSVMD DNTANIDLHD GNDQRLEDCS  180
TSISTVMDCS GVAMKGESKE DDGPLLLPYV DMDSMFDVSE LFFNDDTEEQ NHDLFNENDA  240
LPVLFPSDLD LDFDFGLGSD FDFGSFDSFG LSGYFVSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.12e-10M-type_MADS family protein