PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA12403.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 475aa    MW: 52309.8 Da    PI: 4.9736
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA12403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS369.83.7e-1131124724374
        GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaI 102
                  Ll+cAeav+ ++l +a+ lL ++sel+sp g++ +R+a+yf++AL++r+ + + + y+ l+ ++ + ++s++  +al+ ++ +sP++kfsh+taNqaI
  OVA12403.1 112 ILLQCAEAVAMDNLDEASDLLPEISELSSPFGSSPERVASYFAQALQSRIISCCLGSYSPLNIKTLTLTQSQRICNALQSYNSISPLIKFSHFTANQAI 210
                 69************************************************************************************************* PP

        GRAS 103 leavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
                  +a+ege+r+HiiD+di+qGlQWp L++ LasR+ ++  s+RiTg+gs    s e+le+tg+rL++fA++lg+pfef++l  k  +  +l++L+ ++gE
  OVA12403.1 211 FQALEGEDRIHIIDLDIMQGLQWPGLFHILASRSkKKIKSMRITGIGS----SVEMLEATGRRLSDFASSLGLPFEFQPLEGKVGNINDLSRLSPRQGE 305
                 **********************************55667*********....9**************************97777777799********* PP

        GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvva 299
                 + +V++++  h l+d ++s       +L+l+k l+Pk++++veq+++h +++Fl rf+eal+yysalfd+l  +l+ +s er+ vE++l+g ei+n+va
  OVA12403.1 306 TSVVHWMH--HCLYDITGSDLG----TLRLLKLLRPKLITIVEQDLSH-GGNFLGRFVEALHYYSALFDALGDGLGGDSWERHQVEQQLFGCEIRNIVA 397
                 ******99..777777777777....**********************.789*********************************************** PP

        GRAS 300 cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.eesgslvlgWkdrpLvsvSaWr 374
                   g +r+ + + +e+W + l+++GF+pv+l+ + a+qa+lll +++++gy++  eesg+l lgWkd +L+++SaW+
  OVA12403.1 398 VGGPKRTGEVK-VERWGDELRRVGFRPVSLGGNPAAQASLLLGMFPWKGYTLVeEESGCLKLGWKDLSLLAASAWQ 472
                 *****998887.9*************************************9763789******************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MLQSLLPPHQ SSSSSSYANP NSTSSMKTKR IDDQDHLFLS SDHHHHSIVD EDEDEDDPPP  60
PRKKQNSAGD QSATVSGEKS TKHEDDQITG EEEEAEDVIT GDESNGLRLL GILLQCAEAV  120
AMDNLDEASD LLPEISELSS PFGSSPERVA SYFAQALQSR IISCCLGSYS PLNIKTLTLT  180
QSQRICNALQ SYNSISPLIK FSHFTANQAI FQALEGEDRI HIIDLDIMQG LQWPGLFHIL  240
ASRSKKKIKS MRITGIGSSV EMLEATGRRL SDFASSLGLP FEFQPLEGKV GNINDLSRLS  300
PRQGETSVVH WMHHCLYDIT GSDLGTLRLL KLLRPKLITI VEQDLSHGGN FLGRFVEALH  360
YYSALFDALG DGLGGDSWER HQVEQQLFGC EIRNIVAVGG PKRTGEVKVE RWGDELRRVG  420
FRPVSLGGNP AAQASLLLGM FPWKGYTLVE EESGCLKLGW KDLSLLAASA WQPSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-155GRAS family protein