PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA12403.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | GRAS | ||||||||
Protein Properties | Length: 475aa MW: 52309.8 Da PI: 4.9736 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 369.8 | 3.7e-113 | 112 | 472 | 4 | 374 |
GRAS 4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaI 102 Ll+cAeav+ ++l +a+ lL ++sel+sp g++ +R+a+yf++AL++r+ + + + y+ l+ ++ + ++s++ +al+ ++ +sP++kfsh+taNqaI OVA12403.1 112 ILLQCAEAVAMDNLDEASDLLPEISELSSPFGSSPERVASYFAQALQSRIISCCLGSYSPLNIKTLTLTQSQRICNALQSYNSISPLIKFSHFTANQAI 210 69************************************************************************************************* PP GRAS 103 leavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200 +a+ege+r+HiiD+di+qGlQWp L++ LasR+ ++ s+RiTg+gs s e+le+tg+rL++fA++lg+pfef++l k + +l++L+ ++gE OVA12403.1 211 FQALEGEDRIHIIDLDIMQGLQWPGLFHILASRSkKKIKSMRITGIGS----SVEMLEATGRRLSDFASSLGLPFEFQPLEGKVGNINDLSRLSPRQGE 305 **********************************55667*********....9**************************97777777799********* PP GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvva 299 + +V++++ h l+d ++s +L+l+k l+Pk++++veq+++h +++Fl rf+eal+yysalfd+l +l+ +s er+ vE++l+g ei+n+va OVA12403.1 306 TSVVHWMH--HCLYDITGSDLG----TLRLLKLLRPKLITIVEQDLSH-GGNFLGRFVEALHYYSALFDALGDGLGGDSWERHQVEQQLFGCEIRNIVA 397 ******99..777777777777....**********************.789*********************************************** PP GRAS 300 cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.eesgslvlgWkdrpLvsvSaWr 374 g +r+ + + +e+W + l+++GF+pv+l+ + a+qa+lll +++++gy++ eesg+l lgWkd +L+++SaW+ OVA12403.1 398 VGGPKRTGEVK-VERWGDELRRVGFRPVSLGGNPAAQASLLLGMFPWKGYTLVeEESGCLKLGWKDLSLLAASAWQ 472 *****998887.9*************************************9763789******************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 475 aa Download sequence |
MLQSLLPPHQ SSSSSSYANP NSTSSMKTKR IDDQDHLFLS SDHHHHSIVD EDEDEDDPPP 60 PRKKQNSAGD QSATVSGEKS TKHEDDQITG EEEEAEDVIT GDESNGLRLL GILLQCAEAV 120 AMDNLDEASD LLPEISELSS PFGSSPERVA SYFAQALQSR IISCCLGSYS PLNIKTLTLT 180 QSQRICNALQ SYNSISPLIK FSHFTANQAI FQALEGEDRI HIIDLDIMQG LQWPGLFHIL 240 ASRSKKKIKS MRITGIGSSV EMLEATGRRL SDFASSLGLP FEFQPLEGKV GNINDLSRLS 300 PRQGETSVVH WMHHCLYDIT GSDLGTLRLL KLLRPKLITI VEQDLSHGGN FLGRFVEALH 360 YYSALFDALG DGLGGDSWER HQVEQQLFGC EIRNIVAVGG PKRTGEVKVE RWGDELRRVG 420 FRPVSLGGNP AAQASLLLGM FPWKGYTLVE EESGCLKLGW KDLSLLAASA WQPSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41920.1 | 1e-155 | GRAS family protein |