PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA12348.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 69aa    MW: 7941.34 Da    PI: 10.7049
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA12348.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.63.9e-29959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+i+n++ rqvtf kRr g+lKKAeELSvLCdaeva+iifs tgkl+eyss
  OVA12348.1  9 KKIDNTTARQVTFWKRRRGLLKKAEELSVLCDAEVALIIFSATGKLFEYSS 59
                78***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    
MAREKIQIKK IDNTTARQVT FWKRRRGLLK KAEELSVLCD AEVALIIFSA TGKLFEYSSS  60
RSLSHFPLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24540.15e-33MIKC_MADS family protein