PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12053.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

GeBP

Protein Properties

Length: 340aa MW: 39412.9 Da PI: 5.2512

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12053.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	99.6	2.9e-31	146	241	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgk.spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 f+r+wse Deiv+L+G+ ++ +k+g +p++d+++f ef+k+s+ + v++ ql +K+r+LK+K+ +++kk+++ + +fsk+hd+ f++skkiW+ OVA12053.1 146 FKRVWSEGDEIVILKGMAKYMKKKGLkEPTKDMNEFLEFIKDSLYSSVTNVQLGSKLRHLKDKYMNEKKKKNRSGKLNFSKPHDERLFKYSKKIWD 241 89*********************98999************************************9**********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MTSNSPLATA ASSSSSSSEE EEQQQQQQQS DDHNRESEES EKETEESDEK KEVENEEDEE 60 EGEKEAEEVD QSEEENEDQG TSNKLRGTSV NSGADSDHID EKKPKSKRPT TEKPLIDDNT 120 ADKLKVEKRR KMNHDPVETE KKCLPFKRVW SEGDEIVILK GMAKYMKKKG LKEPTKDMNE 180 FLEFIKDSLY SSVTNVQLGS KLRHLKDKYM NEKKKKNRSG KLNFSKPHDE RLFKYSKKIW 240 DTSPKEKDVM VVEGRFKYSK KVWDTEFFKP LSLGGGLWNK EGLVELIGSS KANEFEEKWR 300 KQIIVEAKFI MKRIDFTGEY MKMVLEAFES SSSSNFLRCH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	130	LKVEKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	9e-13	GeBP family protein