PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA11967.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

GRAS

Protein Properties

Length: 606aa MW: 66855.3 Da PI: 9.1882

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA11967.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	26.9	5.8e-09	260	314	1	55
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar 55 l++ L+++A+a+s+g+ e+a + L +l+ +++ + d+ qRl+ay++ AL++r++ OVA11967.1 260 LKQSLIDAANAISEGKIEAAISNLDHLKPISNTKVDSEQRLTAYMVSALRSRINP 314 5789************************************************985 PP
2	GRAS	37.5	3.5e-12	316	379	122	181
GRAS 122 GlQWpaLlqaLasRp...egppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvl 181 GlQ+++L++a+a+R+ + + s++iT+v +p+ g +++ l+ +g+ L+++A+ +g+ f++nvl OVA11967.1 316 GLQYITLIHAFAERSlpgKTKTSIKITTVTDPSDGsEENVLRIVGDWLKNLADGVGIGFKYNVL 379 9************9866678*******9989999********************97 PP
3	GRAS	154.5	9.8e-48	379	534	210	363
GRAS 210 lhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrer 308 lhrl+desvs+e++rde+L++vk+l Pkvv++veqe+++n+++F++r++e++ yy alfdsl+a++ r+s++r+ vE+ l+r+++n vaceg++r+er OVA11967.1 379 LHRLPDESVSTENPRDELLRFVKGLGPKVVTLVEQEMNCNTAPFVARLTESCGYYRALFDSLDATMTRDSKKRARVEEY-LARKATNSVACEGRDRVER 476 8***************************************************************************9.*************** PP GRAS 309 hetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveee.sgslvlgWk 363 +e ++kWr+r+++aGF+ pls+++ ++ ++ l+ v+ + g++v+ee +gs++ gW OVA11967.1 477 CEVFGKWRARMGMAGFELRPLSQNVSDSLRSRLSSVHrtNPGFTVKEEpEGSALDGWV 534 ******************************99987889*9774788888886 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MASGFPGGGD FYNSAGVNGG GGGSSMMNNV HQVQYRSQLG GILVDSSSSS PMVPPRRTDL 60 LAKRSLAELQ LQHQHQQQQQ QQAFLMRMVK QRTQQQQQLN RTSPISPLSP VDSEISTRYG 120 YGSSQVVLGN NQGFGINHHP LLLQPPRLIS PNIQSSNLSE PSLSNLSFSN SVPQNRQALL 180 DDEDDVYSVE DGDTASVITG NNEWTETMQN LLSPPPNPNN NNNNNNNNNN QKPLSPSPTT 240 SSSSSSSSSS PTSQLSSISL KQSLIDAANA ISEGKIEAAI SNLDHLKPIS NTKVDSEQRL 300 TAYMVSALRS RINPVGLQYI TLIHAFAERS LPGKTKTSIK ITTVTDPSDG SEENVLRIVG 360 DWLKNLADGV GIGFKYNVLH RLPDESVSTE NPRDELLRFV KGLGPKVVTL VEQEMNCNTA 420 PFVARLTESC GYYRALFDSL DATMTRDSKK RARVEEYLAR KATNSVACEG RDRVERCEVF 480 GKWRARMGMA GFELRPLSQN VSDSLRSRLS SVHRTNPGFT VKEEPEGSAL DGWVYRRASG 540 TAQNLEREGR ERVAERGEEE PKSKRNRERS REKSREIERE GREREGKGRG LSSSTHFIKR 600 TTLPPS

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MASGFPGGGD FYNSAGVNGG GGGSSMMNNV HQVQYRSQLG GILVDSSSSS PMVPPRRTDL  60
LAKRSLAELQ LQHQHQQQQQ QQAFLMRMVK QRTQQQQQLN RTSPISPLSP VDSEISTRYG  120
YGSSQVVLGN NQGFGINHHP LLLQPPRLIS PNIQSSNLSE PSLSNLSFSN SVPQNRQALL  180
DDEDDVYSVE DGDTASVITG NNEWTETMQN LLSPPPNPNN NNNNNNNNNN QKPLSPSPTT  240
SSSSSSSSSS PTSQLSSISL KQSLIDAANA ISEGKIEAAI SNLDHLKPIS NTKVDSEQRL  300
TAYMVSALRS RINPVGLQYI TLIHAFAERS LPGKTKTSIK ITTVTDPSDG SEENVLRIVG  360
DWLKNLADGV GIGFKYNVLH RLPDESVSTE NPRDELLRFV KGLGPKVVTL VEQEMNCNTA  420
PFVARLTESC GYYRALFDSL DATMTRDSKK RARVEEYLAR KATNSVACEG RDRVERCEVF  480
GKWRARMGMA GFELRPLSQN VSDSLRSRLS SVHRTNPGFT VKEEPEGSAL DGWVYRRASG  540
TAQNLEREGR ERVAERGEEE PKSKRNRERS REKSREIERE GREREGKGRG LSSSTHFIKR  600
TTLPPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52510.1	1e-57	GRAS family protein