PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA11891.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 350aa MW: 39110.7 Da PI: 4.7148 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.6 | 7.5e-19 | 183 | 233 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdps k r++lg+f ta eAaka++ a+ k++g OVA11891.1 183 KYRGVRQRP-WGKFAAEIRDPSR--KGSRVWLGTFETAIEAAKAYDCAAFKMRG 233 8********.**********854..34*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 350 aa Download sequence |
MATQDEASAL DLIRIHLLGD FASLDSFLND ISTSKISGND SISICSEKFQ VLSSRSDSLC 60 SSSSSSESSA DSVFTKQDFD VYDDYLKFDQ EDKKTDDLFE FFSSDPNFET SPQIFDLTQN 120 SETSTSESMS FINNRRRPSK ISVPPVNKPG NWIMNFSTEE TQPIVVQTVV IKQNSSDSGE 180 MRKYRGVRQR PWGKFAAEIR DPSRKGSRVW LGTFETAIEA AKAYDCAAFK MRGSKAILNF 240 PLEAGKSSDE LVNNTCRKRR REIETVEEIK QVKREKTPES DIKPSTSSTT ITTSVLPAAT 300 ATCPLTPSNW MCSWDVNDIC DVPLLSPLSP YPSFFSLSEA YGYLKFLTVV |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 257 | 261 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G51190.1 | 3e-40 | ERF family protein |