PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA11649.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 582aa    MW: 65113.6 Da    PI: 6.3852
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA11649.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS424.39.9e-1302125811373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL+ecA+a+s++ +   ++l++  +  +s +g+p+qRl ay++e+L ar   s++++y+al++++ +   s+e l+++++++e++P++kf++++aN
  OVA11649.1 212 LKKLLIECARALSENRMDDFDKLIEYARSAVSISGEPIQRLGAYLVEGLVARKEASGTNIYRALNCRQPE---SKELLSYMHILYEICPYMKFGYMAAN 307
                 5799*****************************************************************9...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  aI ea+ +e+rvHiiDf+i qG+QW++L+qaLa+Rp+gpp++RiTg+++p s+  + + lee+g+rLa + e++++p+ef++ v     d++ e+L+v
  OVA11649.1 308 GAIAEAFRNEDRVHIIDFQIAQGTQWMTLIQALAARPSGPPHVRITGIDDPVSKyaRGKGLEEVGKRLAAMSEKFKIPVEFHP-VPVFAPDITREMLNV 405
                 ***************************************************9999999*************************.6888999******** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +pgEalaVn+ lqlh+++desv+++++rd +L+++kslsPkv +++eqe+++n+++Fl+rf+eal++ysa+f+s+++ l r  +eri+vE+++l+r+iv
  OVA11649.1 406 RPGEALAVNFPLQLHHTPDESVDVTNPRDGLLRMIKSLSPKVTTLIEQESNTNTTPFLTRFMEALDFYSAMFESIDVPLERVRKERINVEQQCLARDIV 504
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 nv+aceg++r+erhe l+kW+ r+e+aGF+p pls ++++ +++ll+ ++ d y++ e +g+++lgWk+r+L+s+SaW
  OVA11649.1 505 NVIACEGRDRVERHELLGKWKVRFEMAGFRPFPLSFHVNSVIRSLLKSYSTD-YTLVETDGAMLLGWKNRNLISASAW 581
                 **************************************************77.************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 582 aa     Download sequence    
MDMHQMFRFG ATGVDLSSDS SHDSTPVISE WIVGPTKFDI GSSPNSPLSS HFDCDRFTTP  60
SNSQEQCSSS ENLSGISPAC YSSLENDIYS HQTSPSPTHF PNSLQQSPPG SLVLRDVSGA  120
QSMKLALWEI ETALMSPDTN EDEAATLGGA FGGNTRPENL NQRSREPQHG SHVVQPQPLA  180
TPKHQKSSHG FKAEKRHRVT EESRQEIPQG DLKKLLIECA RALSENRMDD FDKLIEYARS  240
AVSISGEPIQ RLGAYLVEGL VARKEASGTN IYRALNCRQP ESKELLSYMH ILYEICPYMK  300
FGYMAANGAI AEAFRNEDRV HIIDFQIAQG TQWMTLIQAL AARPSGPPHV RITGIDDPVS  360
KYARGKGLEE VGKRLAAMSE KFKIPVEFHP VPVFAPDITR EMLNVRPGEA LAVNFPLQLH  420
HTPDESVDVT NPRDGLLRMI KSLSPKVTTL IEQESNTNTT PFLTRFMEAL DFYSAMFESI  480
DVPLERVRKE RINVEQQCLA RDIVNVIACE GRDRVERHEL LGKWKVRFEM AGFRPFPLSF  540
HVNSVIRSLL KSYSTDYTLV ETDGAMLLGW KNRNLISASA WH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-175GRAS family protein