PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA11355.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 296aa    MW: 32018 Da    PI: 9.4122
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA11355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.12.3e-14108152347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky
       OVA11355.1 108 PWTEEEHRTFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKY 152
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MGRKCSHCGN MGHNSRTCNS NKGSVVGGLK LFGVQLDIHS SSSCSSSIPM KKSFSMDCLS  60
SSSSASSSSP SSSSSCRVFV NENSDKTSHG YLSDGLLGRN QERKKGVPWT EEEHRTFLAG  120
LEKLGKGDWR GISRSFVTTR TPTQVASHAQ KYFLRQTSLN KKKRRSSLFD VGGSCNKSSD  180
DLYSNSTNSN LSLNMKTAQN EVQQGTIQPL VDLNSLEQAT TMNDQVGKCS QFSPCLSPVP  240
FWGNVSFETQ PRSCLVTMPN LRTVTPDLEL TLAAPRPLDQ SKASTGSLLI GPISVI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161165KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.14e-57MYB_related family protein