PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA11301.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

GATA

Protein Properties

Length: 549aa MW: 60675.1 Da PI: 7.6918

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA11301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	51.2	1.7e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ OVA11301.1 7 CFHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41 **************88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MGKQGPCFHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAESDDFEDY 60 KIPKVKNLVI KTKETKLYKR KQNHDSFVVK REAPDYEQNF RRGIEEDTSN RSSSGSAISY 120 SESCAQFGGT DASELTGSAQ SIVWDTLVPS KKRTCVSRPK PSSVEKLTKD LYSILHEQQQ 180 SSYFSGSSEE ELLFESEAPM VSVEIGHGSV LMKHPNSAIR DEESEASSFS IDNKSNTVNE 240 VYSGSAASAS FPVHTSSKGF NCPSVGIDKI RRPLGPGVQS ECSKSDKSHK EKSQILQNRK 300 SPLRSIDLKD VVSFEEFVKH FTLEEQQLLM KHLPSTDTAR LPDSLKSMFS SAQFAENLSS 360 FQQLLAEGVF DLSFSGMNTE ECKTLKKLAL VNLTKSKWVE HYNLLKDVKG KQSTGGKGVA 420 TGSNVLGSNN LLPVKRPRDP QNQNFPEPKA VMKSPKRLFL KAGYETKDLI ENDGSCFSPR 480 SLFAFPPDRS SLMLDCFNFT DDSSDQDLLF DVPPNGSFPQ AELLHPSSSF SSQQASTSSS 540 VICPHLTNP

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MGKQGPCFHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAESDDFEDY  60
KIPKVKNLVI KTKETKLYKR KQNHDSFVVK REAPDYEQNF RRGIEEDTSN RSSSGSAISY  120
SESCAQFGGT DASELTGSAQ SIVWDTLVPS KKRTCVSRPK PSSVEKLTKD LYSILHEQQQ  180
SSYFSGSSEE ELLFESEAPM VSVEIGHGSV LMKHPNSAIR DEESEASSFS IDNKSNTVNE  240
VYSGSAASAS FPVHTSSKGF NCPSVGIDKI RRPLGPGVQS ECSKSDKSHK EKSQILQNRK  300
SPLRSIDLKD VVSFEEFVKH FTLEEQQLLM KHLPSTDTAR LPDSLKSMFS SAQFAENLSS  360
FQQLLAEGVF DLSFSGMNTE ECKTLKKLAL VNLTKSKWVE HYNLLKDVKG KQSTGGKGVA  420
TGSNVLGSNN LLPVKRPRDP QNQNFPEPKA VMKSPKRLFL KAGYETKDLI ENDGSCFSPR  480
SLFAFPPDRS SLMLDCFNFT DDSSDQDLLF DVPPNGSFPQ AELLHPSSSF SSQQASTSSS  540
VICPHLTNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-138	GATA family protein