PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA11212.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 337aa MW: 38464 Da PI: 5.4212

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA11212.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.6	1.9e-15	31	78	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W+++++ g+ R++k+c++rw +yl OVA11212.1 31 KGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 78 79****************************99**********97 PP
2	Myb_DNA-binding	51.7	1.9e-16	87	128	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++ E++ +d++++lG++ W++Ia++++ gRt++++k++w+++ OVA11212.1 87 LSESEEQMVIDLHARLGNR-WSKIAAHLP-GRTDNEIKNHWNTH 128 5899*************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MRRERKGEGV EERSRVEYLT LEMQAKARLK KGPWTAEEDK KLINFILTNG QCCWRAVPKL 60 AGLLRCGKSC RLRWTNYLRP DLKRGLLSES EEQMVIDLHA RLGNRWSKIA AHLPGRTDNE 120 IKNHWNTHIK KKLRKMGIDP LTHQPLFPSV STDDHPQKPA EQFPAVLQNL PEAEHNMGID 180 QNSLQSSSIT DHHPKEEGQE NSTTNFMMNS STGNSDDFYS TNVINSTENS DGFCTDEVPL 240 IQPHEILVNC GPTSSVSSSS SSSSCSGSSN CWVPDDLQFP NLDWPEYTNM GLWDDFNSTW 300 DFICDDNDHE RKLAVDVPLT QYPRMVLDQE AWKFELL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16600.1	2e-84	MYB family protein