PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA11096.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family ARF
Protein Properties Length: 864aa    MW: 95333.1 Da    PI: 6.2615
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA11096.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.75.3e-24207308199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+lt sd++++g +++p++ ae++      + +++ s++l+ +d++g  W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   + +++el+
  OVA11096.1 207 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGMMWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGDNGELR 302
                 99****************************963.3445679************************************************..3489999* PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 ++++r+
  OVA11096.1 303 LGIRRA 308
                 ***997 PP
2Auxin_resp112.83.2e-37334414282
  Auxin_resp   2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                 a+a+stk+vF++ Y Pr+s+seF+++++k++k ++ ++s+GmRfkm+fete+++err++G+++g+sdldpvrWp+SkWrsL
  OVA11096.1 334 AKAVSTKTVFHINYTPRVSPSEFIIPFHKFSKGFDLSFSIGMRFKMRFETEEAAERRYTGMIAGISDLDPVRWPGSKWRSL 414
                 6899***************************************************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 864 aa     Download sequence    
MTEERKERER ERTIKGRERN REKDEQIQQQ QQQQEGISQK YGRCAWGFHL MGGLIDLNNT  60
ITEDEDTAAA PANATALLMS SSASISPSPS AVCLELWHAC AGPHISLPKK GSVVVYLPQG  120
HLEHISELPP SMVYNLPPHV FCRVLDVTLH AELATDEVYA QVSLIPENEI EQKWKGDKME  180
DDAIFEEEEI EGEGVGSKSS TTTPHMFCKT LTASDTSTHG GFSVPRRAAE DCFPPLDYKQ  240
QRPSQELVAK DLHGMMWKFR HIYRGQPRRH LLTTGWSAFV NKKKLVSGDA VLFLRGDNGE  300
LRLGIRRASQ FKGGVPFSVL CGQSLNTSTL TSLAKAVSTK TVFHINYTPR VSPSEFIIPF  360
HKFSKGFDLS FSIGMRFKMR FETEEAAERR YTGMIAGISD LDPVRWPGSK WRSLLVRWDD  420
TVEMNRHNRV SPWEIEPSGS ISGSGNLSPP GSKRAKICLP SKKPDFPVPN GAGFLDFGES  480
LRFQKVLQGQ EIFGLNTPYD GNDVQNHQPY DIRRCDPGSN SSGMAGILNG VKILTGNSDI  540
SSKGIIGFGE SVGFHKVLQG QEIFPKTPHT RTPIDNWAHD NGGFGLFDGV HSSTAGSGWS  600
AIMQGHCGYA QATTPSAKVS SPSSVLMFQQ ASTRVTYPRN AYAINNQEKE DLPSMFIPEL  660
WKEHNQIGST HPPTSLVSRA DLTGDQGLAP TSRNACRLFG FPLTGETHVA NEEDANTPIT  720
SPSSTENLYP DTSLATSAER PLHMGPTSST KTFGRSCTKV HKQGSVVGRA IDLTKLDGYA  780
DLICELERLF NMEGLLNDPE KGWQVVYTDQ EDEKMLIGDG PWQEFCNIVS KILIYTRNEE  840
VVETGNDANS CSEGEPGLIG ISGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60450.10.0ARF family protein