PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10986.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TCP

Protein Properties

Length: 389aa MW: 41171.1 Da PI: 10.3923

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.5	8.2e-37	98	199	2	103
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg......kaaks 93 +g++ +++++hTkv+gR+RRvR++a+caar+F+L++eLG+++d++ti WLl+ a+p+i+++tgt++++a ++ + + + +aa + OVA10986.1 98 PGRRASTKDRHTKVEGRGRRVRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPSIIAATGTGTIPAIAMsV-GGTL-KI-----PttspatEAADQ 189 6899************************************************************9999955521.1111.11.....111111122222 PP TCP 94 aakskksqks 103 ++k+k+++ s OVA10986.1 190 TTKKKRKRPS 199 2233333332 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MASIQKQEVE GDDKENNKKL PSSDPSMAAP PSQPPQPPPS PPPVPTQQKQ AIQVVSLKEE 60 PTEIEPDVKE TPIPQSVLPV AIQMPMPMTM QVKKSTTPGR RASTKDRHTK VEGRGRRVRM 120 PATCAARIFQ LTRELGHKSD GETIRWLLEH AEPSIIAATG TGTIPAIAMS VGGTLKIPTT 180 SPATEAADQT TKKKRKRPST SEFFDATTDG VSVSSGLAPI GATAVTPASI GATAVAAAPQ 240 GFMPMWAFSS EGRVIPSNAV AAGTFWMIPP TSAIAGPSLQ PQLWTFPPTV TPLVNISARP 300 ISSFITTMQP GINLATAIQV QAVPPPTATS SSVAPTNPVS KSSKKSVMAP SSSSNITTTT 360 TTQMLRDFSL EILEKQEFQF MGRSSSNHP

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MASIQKQEVE GDDKENNKKL PSSDPSMAAP PSQPPQPPPS PPPVPTQQKQ AIQVVSLKEE  60
PTEIEPDVKE TPIPQSVLPV AIQMPMPMTM QVKKSTTPGR RASTKDRHTK VEGRGRRVRM  120
PATCAARIFQ LTRELGHKSD GETIRWLLEH AEPSIIAATG TGTIPAIAMS VGGTLKIPTT  180
SPATEAADQT TKKKRKRPST SEFFDATTDG VSVSSGLAPI GATAVTPASI GATAVAAAPQ  240
GFMPMWAFSS EGRVIPSNAV AAGTFWMIPP TSAIAGPSLQ PQLWTFPPTV TPLVNISARP  300
ISSFITTMQP GINLATAIQV QAVPPPTATS SSVAPTNPVS KSSKKSVMAP SSSSNITTTT  360
TTQMLRDFSL EILEKQEFQF MGRSSSNHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	7e-58	TCP family protein