PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA10957.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | GRAS | ||||||||
Protein Properties | Length: 598aa MW: 66559 Da PI: 4.8537 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 442.7 | 2.6e-135 | 230 | 598 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101 elL++cA a+s+g+ +a a+++ l++++s +gdp +R+aay++e+Laar+a s+++ly+al+++ + +s++l+a+++++ev+P++kf++++aN a OVA10957.1 230 ELLFKCAAAISEGNRDEAAAIISDLRQMVSIQGDPSRRIAAYMVEGLAARMAASGQGLYRALKCKVPP---TSDRLSAMQILFEVCPCFKFGFMAANGA 325 79*****************************************************************9...8*************************** PP GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198 I eav+ e+rvHiiDfdi+qG Q+++L+q+Las+p++pp++RiTgv++pes+ l+ +g+rL++fA ++g+pfef++ +a +++d+++++L++++ OVA10957.1 326 IEEAVKDEDRVHIIDFDINQGSQYMTLIQTLASQPGKPPRMRITGVDDPESVqrTVGGLKIIGQRLKEFAGSVGMPFEFRA-LAAKTSDVTPSMLDCHS 423 **************************************************99778889***********************.5999************* PP GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297 +Eal+Vn+++qlh+++desvs+ ++rd++L++vksl Pk+v+vveq++++n+++F+ rf+ea +yy a+f+sl+a++pres +r++vEr++l+r+ivn+ OVA10957.1 424 DEALIVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLDPKLVTVVEQDVNTNTAPFFPRFVEAYNYYLAVFESLDATMPRESPDRMNVERQCLARDIVNI 522 *************************************************************************************************** PP GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 vaceg+er+er e ++kWr+r+++aGFk+ pls+++ ++ +l+++ ++ y+v++ g+l +gW++++L+++SaWr OVA10957.1 523 VACEGEERIERYEVAGKWRARMTMAGFKSCPLSTYVDGAIRVILKQYCDR-YKVKQVGGALHFGWENKSLIVASAWR 598 ************************************************66.*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 598 aa Download sequence |
MSLLRSADQS GTSYGYMLKS SSGSSGLSNP LFSSDKQKFK YEPEIYRGES YDLRYFSDSP 60 TEDFPASRVE FLSPSSNPTT TFHPQGASSY KLLAVSSPSI TEQNPFNSTF AAMRHPNAYQ 120 SHPVVEYLDV QSSDFGMIDY DEDEIRLKLQ ELERELLNDN DDDDDVLGTD QSMDFDSEWV 180 DSIKNLVLPA SPKESSSSDS NISSMSSSKE KHALPTVSSP GLSRTLTPKE LLFKCAAAIS 240 EGNRDEAAAI ISDLRQMVSI QGDPSRRIAA YMVEGLAARM AASGQGLYRA LKCKVPPTSD 300 RLSAMQILFE VCPCFKFGFM AANGAIEEAV KDEDRVHIID FDINQGSQYM TLIQTLASQP 360 GKPPRMRITG VDDPESVQRT VGGLKIIGQR LKEFAGSVGM PFEFRALAAK TSDVTPSMLD 420 CHSDEALIVN FAFQLHHMPD ESVSTVNQRD QLLRMVKSLD PKLVTVVEQD VNTNTAPFFP 480 RFVEAYNYYL AVFESLDATM PRESPDRMNV ERQCLARDIV NIVACEGEER IERYEVAGKW 540 RARMTMAGFK SCPLSTYVDG AIRVILKQYC DRYKVKQVGG ALHFGWENKS LIVASAWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21450.1 | 0.0 | GRAS family protein |