PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA10841.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 230aa    MW: 25868.4 Da    PI: 8.4715
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA10841.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF71.57.4e-231765149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                krie +  rqvtfskRr g++KKA+EL++LC+ae avi+fs+ gk y +
  OVA10841.1 17 KRIEKEDARQVTFSKRRVGLFKKASELCTLCAAETAVIVFSPAGKPYSF 65
                79******************************************98877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MSSKRKLSKG RRKIEIKRIE KEDARQVTFS KRRVGLFKKA SELCTLCAAE TAVIVFSPAG  60
KPYSFGHPSV DTIVDRYLSG GDYASQNNVS GVHPHVGARI RDLNRQYTEA LNELDAEKKR  120
GMELEKVRRN SKNQHWWEKP IEELGLQELE LLKAALDEVK EIVAEHRADE LLIDSSHFTP  180
FLPIMNPIGM SSTTPNGYPF EPNPNPNHLH TSVLPQHDYG FGFGFGCPGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.11e-37M-type_MADS family protein