PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA10793.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 262aa    MW: 30054.2 Da    PI: 7.7425
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA10793.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF44.22.4e-141152344
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                i  +  r++tf kR++g+ KK +E S+LC++++++i++++++
  OVA10793.1 11 IAKEKSRYTTFLKRKKGLKKKIYEFSTLCGVDACMILYAPKQ 52
                666788********************************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MGRAKLNMEL IAKEKSRYTT FLKRKKGLKK KIYEFSTLCG VDACMILYAP KQGDRSIEPE  60
TWPNNLDETH RIIKRLQFLK GLDGITGVVE YAHITQNQNK PNNSNDGTTS WRDDAMHMQS  120
HCYVKSLDHH HHLMTMDYPT DHPVMIFDNA SMMAMNGFDC GNFTSGGTIG NFSYHHPMFK  180
PHPFIYDQTV RVMGDHMEFA NQGTSNSTCL QPPIVQPIMS YHPNQMAGGG SSSHQIMHPQ  240
LFDELHDFQD EPPIKYKRAR FN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11326KEKSRYTTFLKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.14e-13M-type_MADS family protein