PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA10784.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | GRAS | ||||||||
Protein Properties | Length: 134aa MW: 15255.9 Da PI: 7.9316 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 46.9 | 4.8e-15 | 2 | 133 | 202 | 343 |
GRAS 202 laVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerf.lealeyysalfdsleaklpreseerikvErellgreivnvva 299 +a nl+l ++rll +l+s ++++L++++++s ++vv+v++e +sesFl + ++ e+ys+l++s++a + + + + + r+ll+ +i vva OVA10784.1 2 IAMNLSLLIFRLL---SALDS-ITSILRFLRRISLQIVVFVDNEGCKDSESFLFCLnFNGHEFYSVLLESMDAANSGDVNFVRRIKRFLLQLRIAGVVA 96 7899999999999...33333.667*******************999999999887458999*********999888889999***************9 PP GRAS 300 cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrk 343 + + Wre + aG+ pvplse +++qa+ l+r+ OVA10784.1 97 AGRNC-------ILPWRELFFGAGMMPVPLSECTESQADWLMRR 133 97776.......899************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence |
MIAMNLSLLI FRLLSALDSI TSILRFLRRI SLQIVVFVDN EGCKDSESFL FCLNFNGHEF 60 YSVLLESMDA ANSGDVNFVR RIKRFLLQLR IAGVVAAGRN CILPWRELFF GAGMMPVPLS 120 ECTESQADWL MRRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60630.1 | 1e-14 | GRAS family protein |