PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA10438.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 514aa    MW: 57211.4 Da    PI: 6.2487
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA10438.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS344.12.3e-1051085011373
        GRAS   1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlar..svselykalppsetsekn.........sseelaalklfs 85 
                 lv+lL+++Aea++  +++  l++ +L rl+el+sp+  ++m+RlaayfteAL++ l +    s+  +++ +s +++++          +++laa++l++
  OVA10438.1 108 LVHLLMAAAEALTGANKSrdLVRVILVRLKELVSPSNgTNMERLAAYFTEALQSLLEGagVHSKHHHSIFSSGSHHHHhhhqspslhPTDALAAFQLLQ 206
                 68**********997777669***********888765******************983322222222222222222235667888788999999**** PP

        GRAS  86 evsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
                 ++sP++kf+h+taNqaIlea+++++rvH++D+di++G+QW++L+qaL sR++gpp  +lRiT++ + ++g  s  +++etg+rL  fA+++g+pf+f+ 
  OVA10438.1 207 DMSPYVKFGHFTANQAILEATAHDRRVHVVDYDIMEGIQWASLMQALVSRKDGPPapHLRITALTRGNNGrkSIGTVQETGRRLIAFAASIGLPFSFHQ 305
                 ***************************************************776555*********999888999************************ PP

        GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpre 278
                    +  e++++++L++ +gEal+Vn++l+  ++  +  ++     ++L+  k l+P++v++ve+e+   +++ F+ rf+++l++ysa+fdslea++p +
  OVA10438.1 306 CRLDPDESFRPSALKLVKGEALIVNCMLHFPHFSYRAPDS---VASFLSGAKALNPRLVTLVEEEVGPiGDGGFVGRFMDSLHHYSAVFDSLEAGFPMQ 401
                 9999************************999998555544...459*******************9988****************************** PP

        GRAS 279 seerikvErellgreivnvvacegaer.rer....hetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrvee.esgslvlgWkdrpLvsvS 371
                 +++r+ vEr++lg++i   +a   ++r +e+    +e+ e W e++   G++pv +s ++ +qaklll  ++ dgyrvee +++ lvlgWk+r+L+s+S
  OVA10438.1 402 NRARALVERVFLGPRIAGRLARIYRARgVEEeegiEEEEECWGEWMVGTGYRPVGISFFNHCQAKLLLGLFN-DGYRVEEfNNNRLVLGWKTRRLISAS 499
                 ******************99998887632221111456788*******************************.******62688999************ PP

        GRAS 372 aW 373
                  W
  OVA10438.1 500 LW 501
                 ** PP
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    
MAMAMEVDLT ELDFSGCSTT TTTTTTEDGV TCNWNDWSPV VDWDVFSNDT DDFRGLMESM  60
MSDHDELEQV IRVQDRSNSI SVSTPSSVTP TKSKEDDANT HDLKGLRLVH LLMAAAEALT  120
GANKSRDLVR VILVRLKELV SPSNGTNMER LAAYFTEALQ SLLEGAGVHS KHHHSIFSSG  180
SHHHHHHHQS PSLHPTDALA AFQLLQDMSP YVKFGHFTAN QAILEATAHD RRVHVVDYDI  240
MEGIQWASLM QALVSRKDGP PAPHLRITAL TRGNNGRKSI GTVQETGRRL IAFAASIGLP  300
FSFHQCRLDP DESFRPSALK LVKGEALIVN CMLHFPHFSY RAPDSVASFL SGAKALNPRL  360
VTLVEEEVGP IGDGGFVGRF MDSLHHYSAV FDSLEAGFPM QNRARALVER VFLGPRIAGR  420
LARIYRARGV EEEEGIEEEE ECWGEWMVGT GYRPVGISFF NHCQAKLLLG LFNDGYRVEE  480
FNNNRLVLGW KTRRLISASL WAYHSSPSDS DFTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-161GRAS family protein