PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10262.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 545aa MW: 58761.4 Da PI: 5.2567

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10262.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.1	7.4e-09	357	406	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + ++ Ka +L + ++Y++sLq OVA10262.1 357 NSHSLAERVRREKISERMKFLQELVPGC---SKVVTGKAVMLDEIINYVQSLQ 406 58************************...8888***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MDLGDKEKCV LEKRNMDNLD YHSPHLASDW QYGNANLSTQ PVLLVPPENS IDGSRGDLIG 60 SSASSSVSMV NSFCPNLWDQ PNSQNLGFFN NNLGTSTSSS NTGVPRSSAM GIDKALNMDW 120 NYPNPIMRGG GFLQTVAGIL PQSLSQFPAD SAFIERAARF SSFSGGSFSD IMNPFSTSQS 180 QHIYSKRGEP IQAPPEVLLD NGLEERSRQE EVAKDISLSV DHGAIKGSPM KNEEANQAIG 240 VSNSEGDEPE FSGGGGQPEL PSMLEGAGGE PSPAKGLGAK KRKRTGQNSE LDQAKGASQL 300 PGEAAKDDTE TKEKGDRNPS SSTGKATGKN SKDTTQALDA PKEDYIHVRA RRGQATNSHS 360 LAERVRREKI SERMKFLQEL VPGCSKVVTG KAVMLDEIIN YVQSLQRQVE FLSMKLAAVN 420 PRLEFSVEGL LAKDMLGSRG GPSPMGFSPD MSMAHPQLHP SQQGLIQAGI TGMGNPSDVL 480 RRTINSQLSQ LTAMNVGYKE LTPQIPNVWD DELHNVIQMN LDANASFQGQ DLNGSLTQGH 540 MKVEN

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MDLGDKEKCV LEKRNMDNLD YHSPHLASDW QYGNANLSTQ PVLLVPPENS IDGSRGDLIG  60
SSASSSVSMV NSFCPNLWDQ PNSQNLGFFN NNLGTSTSSS NTGVPRSSAM GIDKALNMDW  120
NYPNPIMRGG GFLQTVAGIL PQSLSQFPAD SAFIERAARF SSFSGGSFSD IMNPFSTSQS  180
QHIYSKRGEP IQAPPEVLLD NGLEERSRQE EVAKDISLSV DHGAIKGSPM KNEEANQAIG  240
VSNSEGDEPE FSGGGGQPEL PSMLEGAGGE PSPAKGLGAK KRKRTGQNSE LDQAKGASQL  300
PGEAAKDDTE TKEKGDRNPS SSTGKATGKN SKDTTQALDA PKEDYIHVRA RRGQATNSHS  360
LAERVRREKI SERMKFLQEL VPGCSKVVTG KAVMLDEIIN YVQSLQRQVE FLSMKLAAVN  420
PRLEFSVEGL LAKDMLGSRG GPSPMGFSPD MSMAHPQLHP SQQGLIQAGI TGMGNPSDVL  480
RRTINSQLSQ LTAMNVGYKE LTPQIPNVWD DELHNVIQMN LDANASFQGQ DLNGSLTQGH  540
MKVEN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	285	KKRKRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	4e-93	bHLH family protein