PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA09677.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family Trihelix
Protein Properties Length: 331aa    MW: 36387.5 Da    PI: 5.5629
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA09677.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix87.21.9e-2743137186
    trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rWt++e+l+Li++++  e+r+rrg+           +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e++ ++es+s +++ ++l+
  OVA09677.1  43 RWTRHEILVLIQGKKVAENRVRRGRtagsafgsnTLEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWESQISEESESFWVMRNDLR 137
                 8*********************98555666666588*************************************************99*9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MSPEQLSLTV GPVDGHPKPV ISNGGQTSVD GTDDGNRPPR LPRWTRHEIL VLIQGKKVAE  60
NRVRRGRTAG SAFGSNTLEP KWASVSSYCK RHGVNRGPVQ CRKRWSNLAG DFKKIKEWES  120
QISEESESFW VMRNDLRRER KLPGFFDREV YDILDGGVVT ATTPLAVTAD GKDNEGGVVT  180
KAEEEGEEVI FDSGRTAAAD DGLFSDFEQS GQDEKETVVK ETSPTKMVPP PMPISGTANE  240
NQQASNPEKA STSTQEGCKR RRLSSDGGED ITVQDQLIKV LERNSRMLTA QLEAQNVNCQ  300
LDRDQRTDHA NSLVAVLSKL ADALGKIADK L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1259263KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-102Trihelix family protein