PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA09613.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 656aa    MW: 73076.8 Da    PI: 6.1775
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA09613.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS432.92.5e-1322906551374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal...ppsetseknsseelaalklfsevsPilkfshl 96 
                 l +lLl+cAeav+++d +la+++L +ls  ++p gd+mqR+a++fteAL+arla +v    ++    + ++ +++ns e ++++++ ++ +P++kf+h+
  OVA09613.1 290 LLHLLLACAEAVAKEDYSLAKRCLHQLSRFVTPLGDSMQRVASCFTEALSARLAATVAANHNSSspkHNRPFPDTNSLEMMKVYQIVYQSCPYIKFAHF 388
                 579***************************************************9554433333113556666777*********************** PP

        GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                 taNqa++ea+e eervH+iD+di qG QWp+++qaLa+R++g+p lRiTg+gs      e+++etg+ L+++A++l+vpfef++ v++rle+l++++++
  OVA09613.1 389 TANQAMYEAFEAEERVHVIDLDILQGYQWPSFMQALAARRGGAPFLRITGFGS----PLESVRETGRCLTELAQSLNVPFEFHA-VSERLEELKPQMFH 482
                 *****************************************************....99*************************.7************* PP

        GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                  + gEalaVn+v  lhr+     sl++    +L ++++  P +++++eqea++n++ Fl rfleal+yysa+fdsl+a+lp++s er+kvE+ ++++ei
  OVA09613.1 483 RRAGEALAVNSVNILHRVT--GNSLAN----LLGMIRDQAPVIFTLTEQEASLNGPYFLGRFLEALHYYSAIFDSLDATLPSDSTERAKVEQYIFAPEI 575
                 ******************8..555566....******************************************************************** PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +n+va eg er+erh +lekWr+ +e++GFk +plse+a++q k+ll  ++ dgyr+ e+ g+l+lgW+drp++++SaWr
  OVA09613.1 576 RNIVASEGPERVERHVRLEKWRKVMEAMGFKGMPLSENAVTQSKMLLGLYSCDGYRLTEDGGCLLLGWQDRPIIAASAWR 655
                 *******************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 656 aa     Download sequence    
MVKNEKSSLL PISPTASFSE SNNVAPPSSE FDKNNPNPSC LNSQDLKYED VDIEIQSPEN  60
SIWESLFSDQ TDSAGDFMMI TSPKKTPDLM ISSPKRTQPG LQVLGFNQGN SHEHGMQDGE  120
SPPKFSPPSC NSFHVGAYNK GKSHSLRNKI FNSPTKKYMK LESLDEFPTM ERNMDGCHKD  180
GGFQAYPTMK MSSPRCSTES SESRMTLSAM LDSLPSSNSL NFGESTVNQV AVPGGLQMNK  240
EKDVRVYEFN SFLPAPLSQQ QKQQLQKLEH GLLGPLSTMS EPEQISGLQL LHLLLACAEA  300
VAKEDYSLAK RCLHQLSRFV TPLGDSMQRV ASCFTEALSA RLAATVAANH NSSSPKHNRP  360
FPDTNSLEMM KVYQIVYQSC PYIKFAHFTA NQAMYEAFEA EERVHVIDLD ILQGYQWPSF  420
MQALAARRGG APFLRITGFG SPLESVRETG RCLTELAQSL NVPFEFHAVS ERLEELKPQM  480
FHRRAGEALA VNSVNILHRV TGNSLANLLG MIRDQAPVIF TLTEQEASLN GPYFLGRFLE  540
ALHYYSAIFD SLDATLPSDS TERAKVEQYI FAPEIRNIVA SEGPERVERH VRLEKWRKVM  600
EAMGFKGMPL SENAVTQSKM LLGLYSCDGY RLTEDGGCLL LGWQDRPIIA ASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.12e-93GRAS family protein