PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09203.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 233aa MW: 25705.5 Da PI: 8.6217

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09203.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.1	1.9e-14	45	91	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riNs +++Lr+l+P K++Ka+ L +++ ++k+L OVA09203.1 45 KSHSEAERRRRERINSHLDTLRSLVPCT-----DKMDKASLLAEVISHVKEL 91 58***********************7.....6**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MGRGGSSSSS SNSLVLDSER GELVRAPTKL GQKVISEGKS LAALKSHSEA ERRRRERINS 60 HLDTLRSLVP CTDKMDKASL LAEVISHVKE LKRTAVEASK GFVIPMDIDE VRVEPHEDGV 120 LGGPFCIRAS LCCDDRPEIL PNLREALEAC KLETVKVEIS TLAGRMKNVF VMTGCKEENS 180 DDTEVRRLLM SSVHKALRSV LDKIPTSSEF SPRIMLPNKR RRISLFDSSS SSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	51	56	ERRRRE
2	219	223	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	2e-38	bHLH family protein