PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09037.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TCP

Protein Properties

Length: 403aa MW: 43757.5 Da PI: 8.091

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09037.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	128	9.4e-40	65	189	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ OVA09037.1 65 PPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSAPsqlrttyfnpn 163 789******************************************************************999866777777765444455556666666 PP TCP 89 .........................k 89 + OVA09037.1 164 fvtnpqlrmrsewernidesssqqhR 189 66666666665555555554444440 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MEGENGIRRP NFPLQLLEKK EEDICSSSGG YPSLTISAET CSTVVRSNSS SIQTSENLTM 60 IKKPPPKRTS TKDRHTKVDG RGRRIRMPAT CAARVFQLTR ELGHKSDGET IEWLLQQAEP 120 AVIAATGTGT IPANFTSLNI SLRSSGSSMS APSQLRTTYF NPNFVTNPQL RMRSEWERNI 180 DESSSQQHRI LFPGIENPSS TLLNFHSNNH NVNPMLQAKQ ELRDPCLDMS VDTEASLGRK 240 RRPLDQDPSS QQQHHHQQHQ LGNYFLQSSS SGSIPASQIP GTVWMVQNPN SNQVMSGDPI 300 WTFPSVSNPS MYRGSMSSGL HFMNFPTPMA LLSSPQLGAG LATTTTSTGG GGGGGGTSEG 360 HLGMLAALNA YRSLPGSGIS DHHQTTGSES THSHHGGNER HDS

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MEGENGIRRP NFPLQLLEKK EEDICSSSGG YPSLTISAET CSTVVRSNSS SIQTSENLTM  60
IKKPPPKRTS TKDRHTKVDG RGRRIRMPAT CAARVFQLTR ELGHKSDGET IEWLLQQAEP  120
AVIAATGTGT IPANFTSLNI SLRSSGSSMS APSQLRTTYF NPNFVTNPQL RMRSEWERNI  180
DESSSQQHRI LFPGIENPSS TLLNFHSNNH NVNPMLQAKQ ELRDPCLDMS VDTEASLGRK  240
RRPLDQDPSS QQQHHHQQHQ LGNYFLQSSS SGSIPASQIP GTVWMVQNPN SNQVMSGDPI  300
WTFPSVSNPS MYRGSMSSGL HFMNFPTPMA LLSSPQLGAG LATTTTSTGG GGGGGGTSEG  360
HLGMLAALNA YRSLPGSGIS DHHQTTGSES THSHHGGNER HDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	4e-55	TCP family protein