PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA08739.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 530aa MW: 58595.4 Da PI: 7.7363

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA08739.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.4	0.00029	413	450	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++++L++l+ + +K + a++L +A+ YIk L OVA08739.1 413 RKEKLGDRIANLQQLVAPF-----GKTDTASVLMEAIGYIKFL 450 7788899*******998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MESANLHHHH HHHQHHHHQL QEQQLILGSS SSSSSASLYG VGITNNSSWN PNLILNNAGN 60 FNLSTTVNGV LSNSRDLRQN NNDINIHHQV PPSLSCSTTS MIDQDLGFHW GGRSFINDQS 120 ARHELNLAKV KKELIISSSD QYSHHDDQSE GTYNLDDIHQ LAASPRNYFK HEEVKDLHDL 180 SSSTTTDDEN NKLFLRIFSS GDHNLYCNNP QQYSSSAGFA DQHPSSRENH NRYFSQIFPS 240 RNISSPNPSS FSSSTHPILD LNSYRSLDIL SSATKIIGGS SSSTNNNIGQ PASISQSNNL 300 GRRRQLMRDE SSLSFDHHHH HHLDHHDHLQ TSSSSLSWPN IINNHPSKMI SSGCLMNLGA 360 ISSREVATKR SLSSSGSNSS SGGLATKASS QTAAPKKPRL ESSRSSFPPI KVRKEKLGDR 420 IANLQQLVAP FGKTDTASVL MEAIGYIKFL HEQVETLSVP YMKSSVRNNI RPNIQRGSIA 480 GEGEIDEPKR DLRSRGLCLV PLSCTSYITN DVVDVGVNWS SPQYYGGARP

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MESANLHHHH HHHQHHHHQL QEQQLILGSS SSSSSASLYG VGITNNSSWN PNLILNNAGN  60
FNLSTTVNGV LSNSRDLRQN NNDINIHHQV PPSLSCSTTS MIDQDLGFHW GGRSFINDQS  120
ARHELNLAKV KKELIISSSD QYSHHDDQSE GTYNLDDIHQ LAASPRNYFK HEEVKDLHDL  180
SSSTTTDDEN NKLFLRIFSS GDHNLYCNNP QQYSSSAGFA DQHPSSRENH NRYFSQIFPS  240
RNISSPNPSS FSSSTHPILD LNSYRSLDIL SSATKIIGGS SSSTNNNIGQ PASISQSNNL  300
GRRRQLMRDE SSLSFDHHHH HHLDHHDHLQ TSSSSLSWPN IINNHPSKMI SSGCLMNLGA  360
ISSREVATKR SLSSSGSNSS SGGLATKASS QTAAPKKPRL ESSRSSFPPI KVRKEKLGDR  420
IANLQQLVAP FGKTDTASVL MEAIGYIKFL HEQVETLSVP YMKSSVRNNI RPNIQRGSIA  480
GEGEIDEPKR DLRSRGLCLV PLSCTSYITN DVVDVGVNWS SPQYYGGARP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	2e-44	bHLH family protein