PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA08578.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 292aa MW: 31912.4 Da PI: 5.755

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA08578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.1	0.00035	157	195	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq OVA08578.1 157 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 195 6677889999999999998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MNRGILESLP VQQMMTGNPN WGGSVGEEDR SGLSHYQQVK KLENWEEQIL YPSPSVVPSL 60 DVKQEVSESA YVYSLGNGEF QAAASRPNWS QVMPASSPSS CVTSFSSNNM LDFSNRKADG 120 RHEQPDHSSE CNSTATGGAF KKARVQPSST QSTFKVRKEK LGDRITALHQ LVSPFGKTDT 180 ASVLLEAIGY IRFLQSQIEA LSSPYLGSGS GNMRQQQSVQ GEKNSIFPED PGQLENETSM 240 KRRGVPDQDP ENEPKKDLRS RGLCLVPVSC TLQVGSDNGS DYWAPTLGGG FR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	5e-90	bHLH family protein