PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA08349.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | GRAS | ||||||||
Protein Properties | Length: 555aa MW: 61876.3 Da PI: 6.1202 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 251.3 | 3.6e-77 | 157 | 550 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalkl...fsevsPilkfsh 95 ++lL cA a+++g+l+++q+lL l+elas++gd+++Rla+y ++AL ++l++ +s++ + +s +++++ s+e +++ f+evsP+++f++ OVA08349.1 157 EQLLNPCASAITAGNLTRVQHLLYVLHELASSSGDANHRLATYGLRALTHHLSSVTSSVTPTNFSSVAPTSTfaSTEPRLFQRSllkFYEVSPWFTFAN 255 689***************************************************777766554322222223344443333333589************ PP GRAS 96 ltaNqaIleavege......ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.............skeeleetgerLakfAeelgv 174 +aN+ Il+ +++ + +Hi+D+++s+G+QWp+Ll+aL+ R+ ++pp lR+T v+s++ + rL +fA+++++ OVA08349.1 256 TIANSSILQILSQLepdsssRNLHILDIGVSHGIQWPTLLEALSRRSgGPPPLLRLTIVNSNTDHqnystssssapfsVGPPGDDFPTRLLRFAKSINL 354 *********99876566677899************************55667*********988899999887766665666788899*********** PP GRAS 175 pfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..ns.esFlerflealeyysalfds 270 ++++n + + l++l+++ ++++p E+l+V+ +++lh+l +++ + ++er+e+Lk++ +l+P v+++e+++++ n+ ++F+++f++ + y + ++ds OVA08349.1 355 NLQINQINNHPLQTLTPQVINTSPSETLIVCTQFRLHNLNHNNNNPDDERTEFLKFLVKLEPSAVILCENDIECscNQcGDFATGFSRRVGYLWRFLDS 453 ******9999******************************99999999**********************96553244259****************** PP GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLv 368 ++ + + r Er++++ e+ +++ e ++ +e ekW e+++ GF ++e+a + ++llrk++ +++++v+e++g+++l Wk++++ OVA08349.1 454 TSCAF----KGRECEERRVVEAEAATALMSEMEM----NEGREKWCEKMRGLGFVGEGFGEDAIDGGRALLRKYDsNWEMKVDERDGCVCLWWKGQRVS 544 *8886....6666666666666788888888887....88999********************************9999******************** PP GRAS 369 svSaWr 374 ++S W+ OVA08349.1 545 FCSLWK 550 *****8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 555 aa Download sequence |
MITMTINGES DPNHTSDHIL DWLEDTISFL PSFFDDPYNN STTPTVSDIT EFQWWDQDDQ 60 DLIINPSLIS PTTTTTTTAA AAAVATTNLT NLPPAPPLNS KKRKSPNDPN LETVLPLTNH 120 HQNQQNQRRR LVGTTKKPTI KSSTGNSSNN KEGRWAEQLL NPCASAITAG NLTRVQHLLY 180 VLHELASSSG DANHRLATYG LRALTHHLSS VTSSVTPTNF SSVAPTSTFA STEPRLFQRS 240 LLKFYEVSPW FTFANTIANS SILQILSQLE PDSSSRNLHI LDIGVSHGIQ WPTLLEALSR 300 RSGGPPPLLR LTIVNSNTDH QNYSTSSSSA PFSVGPPGDD FPTRLLRFAK SINLNLQINQ 360 INNHPLQTLT PQVINTSPSE TLIVCTQFRL HNLNHNNNNP DDERTEFLKF LVKLEPSAVI 420 LCENDIECSC NQCGDFATGF SRRVGYLWRF LDSTSCAFKG RECEERRVVE AEAATALMSE 480 MEMNEGREKW CEKMRGLGFV GEGFGEDAID GGRALLRKYD SNWEMKVDER DGCVCLWWKG 540 QRVSFCSLWK LGEKC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13840.1 | 1e-134 | GRAS family protein |