PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA08349.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 555aa    MW: 61876.3 Da    PI: 6.1202
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA08349.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS251.33.6e-771575502374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalkl...fsevsPilkfsh 95 
                 ++lL  cA a+++g+l+++q+lL  l+elas++gd+++Rla+y ++AL ++l++ +s++  +  +s +++++  s+e   +++    f+evsP+++f++
  OVA08349.1 157 EQLLNPCASAITAGNLTRVQHLLYVLHELASSSGDANHRLATYGLRALTHHLSSVTSSVTPTNFSSVAPTSTfaSTEPRLFQRSllkFYEVSPWFTFAN 255
                 689***************************************************777766554322222223344443333333589************ PP

        GRAS  96 ltaNqaIleavege......ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.............skeeleetgerLakfAeelgv 174
                  +aN+ Il+ +++       + +Hi+D+++s+G+QWp+Ll+aL+ R+ ++pp lR+T v+s++ +                       rL +fA+++++
  OVA08349.1 256 TIANSSILQILSQLepdsssRNLHILDIGVSHGIQWPTLLEALSRRSgGPPPLLRLTIVNSNTDHqnystssssapfsVGPPGDDFPTRLLRFAKSINL 354
                 *********99876566677899************************55667*********988899999887766665666788899*********** PP

        GRAS 175 pfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..ns.esFlerflealeyysalfds 270
                 ++++n +  + l++l+++ ++++p E+l+V+ +++lh+l +++ + ++er+e+Lk++ +l+P  v+++e+++++  n+ ++F+++f++ + y + ++ds
  OVA08349.1 355 NLQINQINNHPLQTLTPQVINTSPSETLIVCTQFRLHNLNHNNNNPDDERTEFLKFLVKLEPSAVILCENDIECscNQcGDFATGFSRRVGYLWRFLDS 453
                 ******9999******************************99999999**********************96553244259****************** PP

        GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLv 368
                 ++  +    + r   Er++++ e+  +++ e ++    +e  ekW e+++  GF    ++e+a +  ++llrk++ +++++v+e++g+++l Wk++++ 
  OVA08349.1 454 TSCAF----KGRECEERRVVEAEAATALMSEMEM----NEGREKWCEKMRGLGFVGEGFGEDAIDGGRALLRKYDsNWEMKVDERDGCVCLWWKGQRVS 544
                 *8886....6666666666666788888888887....88999********************************9999******************** PP

        GRAS 369 svSaWr 374
                 ++S W+
  OVA08349.1 545 FCSLWK 550
                 *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    
MITMTINGES DPNHTSDHIL DWLEDTISFL PSFFDDPYNN STTPTVSDIT EFQWWDQDDQ  60
DLIINPSLIS PTTTTTTTAA AAAVATTNLT NLPPAPPLNS KKRKSPNDPN LETVLPLTNH  120
HQNQQNQRRR LVGTTKKPTI KSSTGNSSNN KEGRWAEQLL NPCASAITAG NLTRVQHLLY  180
VLHELASSSG DANHRLATYG LRALTHHLSS VTSSVTPTNF SSVAPTSTFA STEPRLFQRS  240
LLKFYEVSPW FTFANTIANS SILQILSQLE PDSSSRNLHI LDIGVSHGIQ WPTLLEALSR  300
RSGGPPPLLR LTIVNSNTDH QNYSTSSSSA PFSVGPPGDD FPTRLLRFAK SINLNLQINQ  360
INNHPLQTLT PQVINTSPSE TLIVCTQFRL HNLNHNNNNP DDERTEFLKF LVKLEPSAVI  420
LCENDIECSC NQCGDFATGF SRRVGYLWRF LDSTSCAFKG RECEERRVVE AEAATALMSE  480
MEMNEGREKW CEKMRGLGFV GEGFGEDAID GGRALLRKYD SNWEMKVDER DGCVCLWWKG  540
QRVSFCSLWK LGEKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-134GRAS family protein