PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA08192.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 242aa MW: 26998.2 Da PI: 9.5447 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.6 | 5e-21 | 77 | 128 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrdp + + +r++lg+f+ta eAaka+++a+ +++g+ OVA08192.1 77 HYRGVRRRP-WGKYAAEIRDP---NrRGTRVWLGTFDTAIEAAKAYDRAAFEMRGN 128 8********.**********9...4334**************************95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 242 aa Download sequence |
MQETTTTTTL LSSSSSSSHD DSSSTTVIKD RKPSLKISLP NPKKKFELIS NFTDQPHNIN 60 QVVDDKKVSD SGDQKKHYRG VRRRPWGKYA AEIRDPNRRG TRVWLGTFDT AIEAAKAYDR 120 AAFEMRGNKA IVNFPLEAGK NSDPPANTTT GRKRPRENDV QEQKYDDEVA AEIIKPLKKE 180 MRSTEQPSTT ADVSSSIGPL TPSNWTAVWE GFDVVEGGIF NVPLLSPLSP HFSFAYPQLM 240 VL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G51190.1 | 2e-52 | ERF family protein |