PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA08160.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 536aa MW: 60753.6 Da PI: 7.3856

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA08160.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.2	1.1e-11	350	395	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h++ Er+RR+++N++f+ Lr+llP+ K +K++ L + +Y+ L OVA08160.1 350 HHKMSERKRREKLNDSFHALRSLLPSG-----SKKDKVSLLSNTRDYLTAL 395 69**********************5.....4999999***9999776 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MDSVFFLDEE ARTQFLQTLA QAFGCTYLCL WSYYPSPSNH LFSLHGWFNV VNTTNEPSSS 60 SHQGLVRTLF DAYRGTLYSV ENGFVPGLAF KEGVPFLEVK ELELLSRAST EIQRQFYRHF 120 MWQSAVFMGC KSGEMEIGMS TVNQTANMEV EMMNWFPDDF SQHSKLRELP RRMDQNWPSS 180 SSSSLRSLSV GSPEYSSLLL NMPSTSFLPE FTKQASIEQT IRPNSISVLL QPNQQILQAY 240 NALGNIQFPN AESDDAAMTR AMLAVISSPA SSSSSHQTRS CGYHLSQESG AFRNYLPDFV 300 PNNVQIKSNL GGQHMLKRAI FFYKNMYMRK RIIEEQQVHE GSRPTSSQLH HKMSERKRRE 360 KLNDSFHALR SLLPSGSKKD KVSLLSNTRD YLTALKAEVS ELQRKNRLLE ARLAPIRGAS 420 SIEEAAVGGS SSSSRVEIQI NQTSESTSNE REIELQVTVR GHCDFMELVS RLLEFLKQVI 480 KDVSLEYMEG NTSQQSQLST NPCYRVIFRL KIKGNQTFDE SAFQEAIERV VADVAK

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MDSVFFLDEE ARTQFLQTLA QAFGCTYLCL WSYYPSPSNH LFSLHGWFNV VNTTNEPSSS  60
SHQGLVRTLF DAYRGTLYSV ENGFVPGLAF KEGVPFLEVK ELELLSRAST EIQRQFYRHF  120
MWQSAVFMGC KSGEMEIGMS TVNQTANMEV EMMNWFPDDF SQHSKLRELP RRMDQNWPSS  180
SSSSLRSLSV GSPEYSSLLL NMPSTSFLPE FTKQASIEQT IRPNSISVLL QPNQQILQAY  240
NALGNIQFPN AESDDAAMTR AMLAVISSPA SSSSSHQTRS CGYHLSQESG AFRNYLPDFV  300
PNNVQIKSNL GGQHMLKRAI FFYKNMYMRK RIIEEQQVHE GSRPTSSQLH HKMSERKRRE  360
KLNDSFHALR SLLPSGSKKD KVSLLSNTRD YLTALKAEVS ELQRKNRLLE ARLAPIRGAS  420
SIEEAAVGGS SSSSRVEIQI NQTSESTSNE REIELQVTVR GHCDFMELVS RLLEFLKQVI  480
KDVSLEYMEG NTSQQSQLST NPCYRVIFRL KIKGNQTFDE SAFQEAIERV VADVAK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	355	360	ERKRRE
2	356	361	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	5e-55	bHLH family protein