PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA07881.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family ARF
Protein Properties Length: 874aa    MW: 97347.2 Da    PI: 6.2941
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA07881.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.42.8e-23128229199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d++  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++ +l
  OVA07881.1 128 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftQQPPAQ--ELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQL 222
                 99*****************************86555544..8************************************************..8899999 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++r+
  OVA07881.1 223 LLGIRRA 229
                 ****997 PP
2Auxin_resp119.33.1e-39254337183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t+s F+++YnPras+seFv++++k+ ka+  ++vsvGmRf+m fete+ss rr++Gt++g++dldpvrWpnS+Wrs+k
  OVA07881.1 254 AAHAAATNSRFTIFYNPRASPSEFVIPLSKYAKAVFhTRVSVGMRFRMLFETEESSVRRYMGTITGINDLDPVRWPNSHWRSVK 337
                 79********************************87599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 874 aa     Download sequence    
MKLSSSSGLG QQSQEGEKRC LNSELWHACA GPLVSLPTVG SRVVYFPQGH SEQVAASTNK  60
EVDGHIPNYP SLPPQLICQL HNVTMHADVE TDEVYAQMTL QPLTQQEQKD TYLPAELGIS  120
SKQPTNYFCK TLTASDTSTH GGFSVPRRAA EKVFPPLDFT QQPPAQELIA RDLHDVEWKF  180
RHIFRGQPKR HLLTTGWSVF VSAKRLVAGD SVLFIWNEKN QLLLGIRRAS RPQTVMPSSV  240
LSSDSMHIGL LAAAAHAAAT NSRFTIFYNP RASPSEFVIP LSKYAKAVFH TRVSVGMRFR  300
MLFETEESSV RRYMGTITGI NDLDPVRWPN SHWRSVKVGW DESTAGERQP RVSLWEIEPL  360
TTFPMYPSLF PLRLKRPWHP GVSSLHDNKD DPTNSLMWLR ADTADRGLHS LNFQGLGVAP  420
WMQQRLDPSL LGNEHDQRYQ AITAAALQDI RNGDPLKQQY MQFQQPLQYL QQSCNPNSLL  480
QEQQIIQQSL PQQILHSQTH NFSENQPAHL LQQPLNGHQN QQAQQHQQTF QQAFQIPDNH  540
FQQQESPLST SFIQKPDFID SNITFSAPLS PSNIQNMLGS ICPEGSGNLL NFSRMSQSML  600
NDPQNQQPWV PKFGYSQVNN FGNSVSLPPF PGKDGVVEQD NCNGDAQTHQ LFGVNIDSSP  660
LLIPGTVPTL GSSSIDAEVS QMPFDATGYQ RSLSGCMDDS ADFVQSAAQV DPPTRTFVKV  720
YKSGSTVGRS LDIARFSSYH ELREELGQMF GIEGQLEDPL RSGWQLVFVD RESDVLLLGD  780
DPWENRNDLV PVPVGSREST FMSSGGADIV GHICRAFVNN VGYIKILSPE DVLKLGKQGV  840
DSLSSNGQKL NSNTCDSRNL VSGIPSVGSL DHWI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein