PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07820.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 494aa MW: 54066.8 Da PI: 6.0523

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07820.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	6.1e-17	30	77	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l ++vk++G g+W+++ + g+ R++k+c++rw ++l OVA07820.1 30 KGPWTAAEDAILMEYVKKHGEGNWNAVQKNSGLSRCGKSCRLRWANHL 77 79******************************************9986 PP
2	Myb_DNA-binding	48.8	1.6e-15	83	126	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T++E+ l+++++ +lG++ W++ a+ ++ gRt++++k++w++ OVA07820.1 83 KGSFTPDEERLILELHSKLGNK-WARMAAQLP-GRTDNEIKNYWNT 126 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MMTNNNNKNS AALSDDASSG GGSGGVALKK GPWTAAEDAI LMEYVKKHGE GNWNAVQKNS 60 GLSRCGKSCR LRWANHLRPN LKKGSFTPDE ERLILELHSK LGNKWARMAA QLPGRTDNEI 120 KNYWNTRVKR RQRAGLPLYP NDIQKQASSF HHHQPYLSQS PQNPTTLHSL SSAQQQKPNF 180 GSPLPLFDPI NLSTAAPFPA HQNSTHFLSS SINGFKRFRT NNYGFSQTFS PSPPSTLQPS 240 TSLFNQNLSN QLLPPPTIQF NPGNYDLNPP PTIMQNQFEP RTMVPMGSAF SMKLELPSNQ 300 LLQPATNVDY KINDSLTRNN SGLLDAMIQE AQAMGDGEDL KREGLLSEQE EKCRIDGLVR 360 DVPSSGAPSS AGQWNDSSPA HSSIGVKKKE PTDEIINSVD DDDDLSSLLD IIPSTMMVSE 420 FYNDGGDQIS NGHSSGVTDE DISLDMQHLP SSLSATTTTT TATTNTTTNT NPTTATTDHD 480 DWSIGAWNNV PDLC

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MMTNNNNKNS AALSDDASSG GGSGGVALKK GPWTAAEDAI LMEYVKKHGE GNWNAVQKNS  60
GLSRCGKSCR LRWANHLRPN LKKGSFTPDE ERLILELHSK LGNKWARMAA QLPGRTDNEI  120
KNYWNTRVKR RQRAGLPLYP NDIQKQASSF HHHQPYLSQS PQNPTTLHSL SSAQQQKPNF  180
GSPLPLFDPI NLSTAAPFPA HQNSTHFLSS SINGFKRFRT NNYGFSQTFS PSPPSTLQPS  240
TSLFNQNLSN QLLPPPTIQF NPGNYDLNPP PTIMQNQFEP RTMVPMGSAF SMKLELPSNQ  300
LLQPATNVDY KINDSLTRNN SGLLDAMIQE AQAMGDGEDL KREGLLSEQE EKCRIDGLVR  360
DVPSSGAPSS AGQWNDSSPA HSSIGVKKKE PTDEIINSVD DDDDLSSLLD IIPSTMMVSE  420
FYNDGGDQIS NGHSSGVTDE DISLDMQHLP SSLSATTTTT TATTNTTTNT NPTTATTDHD  480
DWSIGAWNNV PDLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	4e-70	MYB family protein