PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA07727.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | GRF | ||||||||
Protein Properties | Length: 213aa MW: 23279.3 Da PI: 9.4964 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 82.4 | 3.8e-26 | 97 | 140 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 ++epgrCrRtDGKkWRCs++v++++k+CE+H+hrgr+rsrk++e OVA07727.1 97 EPEPGRCRRTDGKKWRCSKDVVPDQKYCEKHMHRGRNRSRKPVE 140 69***************************************987 PP | |||||||
2 | QLQ | 54.7 | 3.1e-19 | 28 | 63 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT Qlq+L++Q l++K++aa++PvP +L+++i+k OVA07727.1 28 CFTFLQLQELEHQSLIFKHMAAGLPVPFHLVLPIWK 63 69*********************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MGRENSSPPS IGLDLGLGSG LSHGGKSCFT FLQLQELEHQ SLIFKHMAAG LPVPFHLVLP 60 IWKSLASSYG ALHSGSGIYP SFLGCKGVYF DYKNSMEPEP GRCRRTDGKK WRCSKDVVPD 120 QKYCEKHMHR GRNRSRKPVE ITPQVGSSSS NNNITDSNTN LSISIPLQLM TTTSTTTNTN 180 NSTITTNTTI TNLDFSPKSV LQNGGTCKKE PSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37740.1 | 2e-35 | GRF family protein |