PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA07707.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | LBD | ||||||||
Protein Properties | Length: 224aa MW: 24143.4 Da PI: 7.7691 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 130.6 | 6.5e-41 | 21 | 121 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+k+C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA ar+rdPvyG+vg+i++lqqq+ +l+aela ++ OVA07707.1 21 PCGACKFLRRKCVKGCIFAPYFDSEQgSNHFAAVHKVFGASNVSKLLLRIPVHKRLDAVVTICYEALARIRDPVYGCVGHIFALQQQVVNLQAELAFVQ 119 7***********************9989********************************************************************999 PP DUF260 99 ee 100 ++ OVA07707.1 120 AH 121 86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MMMMMSSSGS SSSGSGGGGG PCGACKFLRR KCVKGCIFAP YFDSEQGSNH FAAVHKVFGA 60 SNVSKLLLRI PVHKRLDAVV TICYEALARI RDPVYGCVGH IFALQQQVVN LQAELAFVQA 120 HLSTFEHLPS HHQAAAVMSS AQSSAMVNVH NSSTNILSTS NVSTHFSSLQ SQQQTNLETA 180 SCCSPTEQLP LHMNIDDGDL QTLAREFVSR YLPAEVKFQT SNSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45410.1 | 3e-66 | LBD family protein |