PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07341.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 378aa MW: 42182.1 Da PI: 6.6791

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07341.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.3e-12	199	245	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+Lq OVA07341.1 199 DHIMAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYLKQLQ 245 699**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MENSTIRWLS EMGMDQDQAF IHQMNSFDEI TAQQIAAALG GDQYHFRQSY FSADQTFSSY 60 PPYMETTNSH QTTTITERPS KQLKTSSESW NSCTTTDHQH ISTPPDSSSS PNNLLSFGGN 120 HRNSPTNIPQ QVYGNLVGST TTVNLKEEVV SPGNTTYPSD VLISHQGSYM NKNYAPKGIN 180 QGYKRAASST TTKTSYTQDH IMAERKRREK LSQRFIALSA IVPGLKKMDK ASVLGDAIKY 240 LKQLQEQVKT LEEQTAKKPV ESVIFVRKTQ LQADDNDSSS SDENSSVTGC SDEPLPEIEA 300 RVSDKNVLIR IHCEKRKGVL VNTLAEIEKL HLTILNSSVI PFAESALDIT ITAQTDAEYC 360 MTVKDLVKNL RSAFRQFM

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MENSTIRWLS EMGMDQDQAF IHQMNSFDEI TAQQIAAALG GDQYHFRQSY FSADQTFSSY  60
PPYMETTNSH QTTTITERPS KQLKTSSESW NSCTTTDHQH ISTPPDSSSS PNNLLSFGGN  120
HRNSPTNIPQ QVYGNLVGST TTVNLKEEVV SPGNTTYPSD VLISHQGSYM NKNYAPKGIN  180
QGYKRAASST TTKTSYTQDH IMAERKRREK LSQRFIALSA IVPGLKKMDK ASVLGDAIKY  240
LKQLQEQVKT LEEQTAKKPV ESVIFVRKTQ LQADDNDSSS SDENSSVTGC SDEPLPEIEA  300
RVSDKNVLIR IHCEKRKGVL VNTLAEIEKL HLTILNSSVI PFAESALDIT ITAQTDAEYC  360
MTVKDLVKNL RSAFRQFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	204	209	ERKRRE
2	205	210	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-60	bHLH family protein