PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA06890.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 147aa MW: 16972.3 Da PI: 10.7908 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 126.2 | 7.8e-39 | 75 | 147 | 229 | 301 |
GAGA_bind 229 GWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 GWqSa Ct t+S+yPLPv+++rr++R++grKmS+ f+klL+ L aeG dls+p+DLkdhW +H n ++ti+ OVA06890.1 75 GWQSAYCTSTLSIYPLPVVPNRRHSRLGGRKMSGTTFNKLLSWLLAEGNDLSTPLDLKDHWSRHEKNSYITIK 147 9***********************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
MAEAHYNSRE MQTNKAIPIS VVSSEFPKSR WVRRTKEHKT ISSNKRTLKP SRKVGKRGFD 60 DLNRCFDPCR GHDQGWQSAY CTSTLSIYPL PVVPNRRHSR LGGRKMSGTT FNKLLSWLLA 120 EGNDLSTPLD LKDHWSRHEK NSYITIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42520.3 | 6e-34 | BBR-BPC family protein |