PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06342.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB_related

Protein Properties

Length: 1021aa MW: 113455 Da PI: 9.9619

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06342.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.7	2.3e-07	52	100	3	47
SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + +a +q G+ ++++I ++++ + q++++++ + OVA06342.1 52 AWTHQEEESFFNALRQVGKAcfclsNFEKITSRVQ-SKNKDQVRHYYYRL 100 6***************99***********.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1021 aa Download sequence
MHMESKVRVE CDSLSQSEKS LMKDGETGVT SSSPCIVASQ KPVKRKTRQW AAWTHQEEES 60 FFNALRQVGK ACFCLSNFEK ITSRVQSKNK DQVRHYYYRL VRRMNKLLGP SFSLDAKNSK 120 DTNAAMLRWW ALLEKYSCKA SKLHLKPRRF KIFIEALEHQ LLKDRKKNIR KRPSQGENCS 180 SASPVTVSLH NKAPGHDTRS VKLVVADSQN VQKVGSGRGS SLKRNVNTGT NRSNSKGDLS 240 TVKTVKQRKR TGSSSSAAYK KWEKAAIAGV SLVADAAEHL ERTSIDKKVS PDRRSLDESF 300 PLTVVPTAQK GVDSSGVLPS LPLSASSQTQ FAETSMQQPF AKLKLQLFPI DEGTRRALEK 360 DEHNPYLELT LSARKKISSV LEHLNRKWGK SSIASGELIL FQYSVQRENL VGSQRWTQDT 420 VASAADVYAI VGSPPIFRLR YGWFSTAELS SVTFIPPATP RHIQEEHMHM NIADGKEQNI 480 DGTLMPRLHD CHNSAQLMKS FKDQRSSITE NTDLIPCYTD LPEDIIGCIG MDHEKNIPDA 540 VHAFNSLWPR KEIGDGIIQR QCDNADYLRT SNNTTLSAGD WADSLTNISI GELLTEASQA 600 MGTKLTNEID KLVIESSQFL HQIPFSCDSF DAAIAAHISG RHDKQDVMSA PESHASSIWD 660 AEETRDAFSF QKISRSPTAA SLGTCKQITN TSSTIIRGSV EESPEVRTAC DGPICKGDLT 720 DNCNSETQRP DDYTKDLGGL TDIYWPDSLG PLDLDMPSSR YHDQDLMFGD SITLSGLNRL 780 IASSLDAFQN CSFFGLDKKE QPSTSEARSS ALLLDYKIGG ENLGLRLRFQ TFAMKRRSLD 840 EPKVESMESK DDKFSALAAR LQAQSFSSLS SLSSLDLSLL GSSHMTWKER KALENQRVVS 900 LGGKPVKKQR LPLSAAKVTM KKQKEREQKL LQEGLVLGRF GGRKASSSNR VGEKRKAEDR 960 ILRSSEGYFK NGVLNVKHLL RPTPSRDNFV TRLPSFGAGP KKQGGGGKKR GGGRKHGNKK 1020 R

Sequence ? help Back to Top

Protein Sequence Length: 1021 aa Download sequence

MHMESKVRVE CDSLSQSEKS LMKDGETGVT SSSPCIVASQ KPVKRKTRQW AAWTHQEEES  60
FFNALRQVGK ACFCLSNFEK ITSRVQSKNK DQVRHYYYRL VRRMNKLLGP SFSLDAKNSK  120
DTNAAMLRWW ALLEKYSCKA SKLHLKPRRF KIFIEALEHQ LLKDRKKNIR KRPSQGENCS  180
SASPVTVSLH NKAPGHDTRS VKLVVADSQN VQKVGSGRGS SLKRNVNTGT NRSNSKGDLS  240
TVKTVKQRKR TGSSSSAAYK KWEKAAIAGV SLVADAAEHL ERTSIDKKVS PDRRSLDESF  300
PLTVVPTAQK GVDSSGVLPS LPLSASSQTQ FAETSMQQPF AKLKLQLFPI DEGTRRALEK  360
DEHNPYLELT LSARKKISSV LEHLNRKWGK SSIASGELIL FQYSVQRENL VGSQRWTQDT  420
VASAADVYAI VGSPPIFRLR YGWFSTAELS SVTFIPPATP RHIQEEHMHM NIADGKEQNI  480
DGTLMPRLHD CHNSAQLMKS FKDQRSSITE NTDLIPCYTD LPEDIIGCIG MDHEKNIPDA  540
VHAFNSLWPR KEIGDGIIQR QCDNADYLRT SNNTTLSAGD WADSLTNISI GELLTEASQA  600
MGTKLTNEID KLVIESSQFL HQIPFSCDSF DAAIAAHISG RHDKQDVMSA PESHASSIWD  660
AEETRDAFSF QKISRSPTAA SLGTCKQITN TSSTIIRGSV EESPEVRTAC DGPICKGDLT  720
DNCNSETQRP DDYTKDLGGL TDIYWPDSLG PLDLDMPSSR YHDQDLMFGD SITLSGLNRL  780
IASSLDAFQN CSFFGLDKKE QPSTSEARSS ALLLDYKIGG ENLGLRLRFQ TFAMKRRSLD  840
EPKVESMESK DDKFSALAAR LQAQSFSSLS SLSSLDLSLL GSSHMTWKER KALENQRVVS  900
LGGKPVKKQR LPLSAAKVTM KKQKEREQKL LQEGLVLGRF GGRKASSSNR VGEKRKAEDR  960
ILRSSEGYFK NGVLNVKHLL RPTPSRDNFV TRLPSFGAGP KKQGGGGKKR GGGRKHGNKK  1020
R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1004	1013	GGGGKKRGGG
2	1005	1014	GGGGKKRGGG
3	1006	1015	GGGGKKRGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	0.0	MYB_related family protein