PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06177.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

SRS

Protein Properties

Length: 348aa MW: 37136.8 Da PI: 8.2198

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06177.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	226.6	4.8e-70	112	273	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkele 101 g++sCqdCGnqakkdC h+RCRtCCksrgf+C thvkstWvpa++rrerqqqla+++++ + ++++++r+ ++ +++++++ +++l e++++++ OVA06177.1 112 GGGVSCQDCGNQAKKDCIHMRCRTCCKSRGFQCPTHVKSTWVPASRRRERQQQLASLQQQPPRGDEREREHREITTAATTTTTTLTKRL--RENPNTTS 208 5789***************************************************99998866555544444443333333222222..22222222 PP DUF702 102 tss............lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + +P+ev+s+avfrcvrvs++dd++e++aYqtav+igGhvfkGiLydqG+e+ OVA06177.1 209 LMRlptntsglevgnFPAEVNSTAVFRCVRVSAMDDADEQYAYQTAVNIGGHVFKGILYDQGPES 273 222455668899999**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MAGFSLGGGN QQNPPNEIPP ETLFLYRTEE ISSSYSKGFE LWQQQQQQQQ NLHHHQRQQV 60 QQNIYSSAGL EVGPSRRSNN VSDELSNRAG TMMMRQGGGG GVGSGGGGGG GGGGVSCQDC 120 GNQAKKDCIH MRCRTCCKSR GFQCPTHVKS TWVPASRRRE RQQQLASLQQ QPPRGDERER 180 EHREITTAAT TTTTTLTKRL RENPNTTSLM RLPTNTSGLE VGNFPAEVNS TAVFRCVRVS 240 AMDDADEQYA YQTAVNIGGH VFKGILYDQG PESHYVPGET SSGGGGGEGG GGGGGGGGGS 300 SGRNFITNTS TVQQPSSTAA ALLDPSSLYP TPFNAFMAGT QFFPHPRS

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MAGFSLGGGN QQNPPNEIPP ETLFLYRTEE ISSSYSKGFE LWQQQQQQQQ NLHHHQRQQV  60
QQNIYSSAGL EVGPSRRSNN VSDELSNRAG TMMMRQGGGG GVGSGGGGGG GGGGVSCQDC  120
GNQAKKDCIH MRCRTCCKSR GFQCPTHVKS TWVPASRRRE RQQQLASLQQ QPPRGDERER  180
EHREITTAAT TTTTTLTKRL RENPNTTSLM RLPTNTSGLE VGNFPAEVNS TAVFRCVRVS  240
AMDDADEQYA YQTAVNIGGH VFKGILYDQG PESHYVPGET SSGGGGGEGG GGGGGGGGGS  300
SGRNFITNTS TVQQPSSTAA ALLDPSSLYP TPFNAFMAGT QFFPHPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	6e-61	SRS family protein